Factsheet for Bra022503.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91533	Canola	cytosol	99.24	99.24
Bra008507.1-P	Field mustard	cytosol	90.53	77.6
AT1G64970.1	Thale cress	plastid	88.64	67.24
KRH23974	Soybean	cytosol	71.97	64.19
KRH39821	Soybean	cytosol	72.73	63.58
PGSC0003DMT400006168	Potato	cytosol	69.7	59.35
KRH23976	Soybean	plastid	72.73	54.86
VIT_16s0039g01410.t01	Wine grape	plastid	71.59	54.78
OQU83859	Sorghum	cytosol	62.5	54.46
Os02t0701600-01	Rice	plastid	71.97	52.49
Zm00001d017746_P001	Maize	plastid	69.32	51.99
KXG30932	Sorghum	plastid	69.7	51.69
GSMUA_Achr1P27850_001	Banana	plastid	67.05	51.01
TraesCS6D01G245200.1	Wheat	plastid	70.45	50.96
TraesCS6A01G269700.1	Wheat	plastid	70.45	50.82
HORVU6Hr1G068410.1	Barley	plastid	69.7	49.86
Solyc08g076360.2.1	Tomato	plastid	69.7	49.86
TraesCS6B01G297000.1	Wheat	plastid	68.94	48.02
KXG22885	Sorghum	endoplasmic reticulum	61.36	47.79
Bra025811.1-P	Field mustard	extracellular, golgi	23.86	17.7
Bra006211.1-P	Field mustard	cytosol	21.59	16.67
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	22.35	16.34

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra022503	EnsemblPlants:Bra022503.1	EnsemblPlants:Bra022503.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987
GO:GO:0010189	GO:GO:0016740	GO:GO:0032259	GO:GO:0051741	InterPro:IPR025774	UniProt:M4E155
InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000254576D	:	:	:

Description

AT1G64970 (E=1e-145) G-TMT, TMT1, VTE4 | G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE); tocopherol O-methyltransferase

Coordinates

chrA02:-:9391811..9393610

Molecular Weight (calculated)

29289.4 Da

IEP (calculated)

7.074

GRAVY (calculated)

-0.077

Length

264 amino acids

Sequence
(BLAST)

001: MHHGFYDPDS SVQLSDSGHR EAQIRMIEES LRFAGVTEEE KKIKRVVDVG CGIGGSSRYI ASKFGAECIG ITLSPVQAKR ANDLAAAQSL SHKVSFQVAD
101: ALEQPFEDGI FDLVWSMESG EHMPDKAKFV KELVRVAAPG GRIIIVTWCH RNLSPGEEAL QPWEQNLLDR ICKTFYLPAW CSTSDYVDLL QSLSLQDIKC
201: ADWSENVAPF WPAVIRTALT WKGLVSLLRS GMKSIKGALT MPLMIEGYKK GVIKFGIITC QKPL

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.