CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83859	Sorghum	cytosol	59.59	66.67
KXG30932	Sorghum	plastid	69.62	66.29
KRH23974	Soybean	cytosol	53.98	61.82
Bra022503.1-P	Field mustard	cytosol	47.79	61.36
CDX91533	Canola	cytosol	47.2	60.61
KRH39821	Soybean	cytosol	53.69	60.26
PGSC0003DMT400006168	Potato	cytosol	54.28	59.35
Os02t0701600-01	Rice	plastid	63.13	59.12
TraesCS6A01G269700.1	Wheat	plastid	63.13	58.47
TraesCS6D01G245200.1	Wheat	plastid	62.24	57.81
Bra008507.1-P	Field mustard	cytosol	52.21	57.47
HORVU6Hr1G068410.1	Barley	plastid	62.54	57.45
TraesCS6B01G297000.1	Wheat	plastid	61.36	54.88
KRH23976	Soybean	plastid	56.34	54.57
VIT_16s0039g01410.t01	Wine grape	plastid	55.46	54.49
GSMUA_Achr1P27850_001	Banana	plastid	55.46	54.18
CDY37556	Canola	plastid	53.98	52.74
CDY16380	Canola	plastid	54.28	52.27
CDY56135	Canola	plastid	53.1	51.87
Solyc08g076360.2.1	Tomato	plastid	56.34	51.76
AT1G64970.1	Thale cress	plastid	52.21	50.86
EER93245	Sorghum	cytosol	17.99	17.43
EER95554	Sorghum	extracellular, golgi	18.58	17.17
KXG22604	Sorghum	cytosol	17.4	17.15
KXG34662	Sorghum	cytosol	16.81	16.57
EER90688	Sorghum	cytosol	15.93	16.02
KXG37308	Sorghum	cytosol	16.22	15.62

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	UniProt:A0A1B6PBR1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740
GO:GO:0032259	GO:GO:0051741	InterPro:IPR025774	EnsemblPlants:KXG22885	ProteinID:KXG22885	ProteinID:KXG22885.1
InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25
InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3008G022000	SUPFAM:SSF53335	SignalP:SignalP-noTM	UniParc:UPI00081AC8CE	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:1928877..1930628

Molecular Weight (calculated)

36731.2 Da

IEP (calculated)

6.844

GRAVY (calculated)

-0.064

Length

339 amino acids

Sequence
(BLAST)

001: MRRCSILLPF ILVLHEPGSQ AVRRASSSMA DDEAAPAPAP APAPAPAAGL KESIAALYDE CSGPWERLLS DHIHHGFYDV GEDASSNADH RQAQLRMIEE
101: SLAFAAVPSP DDPKAPKNIV DVGCGLGGSS RYLAKKYGAQ VKGITLSPVQ AERGNALAAA EGLSNQVTAQ VADALQQPFC DGQFDLVWSM ECGEHVPDRR
201: KFVSEMARVA APGGRIIIVA WCHRNLEPSE TSLKPDELSI LKRICNAYYF PEWCSASEYV NIAKSLSLED IKTADWSENI VPFWPACMKL LLSWKGLTSL
301: LTSGWKTIKG VMVIPLLIQG YKKGVVKFAI ITCRKPGAA

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.