CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37308	Sorghum	cytosol	93.77	89.77
EER93245	Sorghum	cytosol	82.79	79.71
Zm00001d013035_P004	Maize	cytosol	83.68	79.44
Os11t0296900-00	Rice	cytosol	35.31	62.63
Os03t0807600-00	Rice	plasma membrane	48.07	62.07
KXG34662	Sorghum	cytosol	62.02	60.76
KXG22604	Sorghum	cytosol	61.72	60.47
HORVU5Hr1G109840.6	Barley	cytosol	51.04	58.11
TraesCS5D01G469400.1	Wheat	nucleus, peroxisome, plastid	58.46	53.1
EER95554	Sorghum	extracellular, golgi	35.01	32.15
OQU83859	Sorghum	cytosol	16.62	18.48
KXG30932	Sorghum	plastid	17.21	16.29
KXG22885	Sorghum	endoplasmic reticulum	16.02	15.93

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	UniProt:C5WW51	EnsemblPlants:EER90688	ProteinID:EER90688	ProteinID:EER90688.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0009058	GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11
PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF2	InterPro:SAM-dependent_MTases
EnsemblPlantsGene:SORBI_3001G046600	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI00081AB5BC	:	:

Description

hypothetical protein

Coordinates

chr1:+:3434174..3440056

Molecular Weight (calculated)

37099.0 Da

IEP (calculated)

5.915

GRAVY (calculated)

-0.185

Length

337 amino acids

Sequence
(BLAST)

001: MSGALDLARS TGGSIDKDQV KSAVDQYLKY HDLHGGEQES RKLNYTDLVN KYYDLVTGFY EYGWGDSFHF AGRYPGETSR EAIKRHEHFI ALQLGLKKGM
101: KVLDVGCGIG GPLIEIARFS SAMITGLNYN DYQISRGKEL VFSAGLSEQC SFLKGDFMNM PIADNTFDAA FAIDATCHAP DAQGVYSEIY RVLKPGQYFA
201: LNEWCLTDRF DPNNAKHLAI KAEIELGDGL PPLASVICAK DLAQDFPCPW YQTIDPNNFS WTSFQCTRPG RIITRAIVNA LEFLRIAPAG SAGIYSFLTS
301: ASDGLLKGGR EGIFTASFFV LGRKPLKETG LANDGNL

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.