CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017746_P001	Maize	plastid	85.96	86.93
OQU83859	Sorghum	cytosol	66.57	78.22
TraesCS6A01G269700.1	Wheat	plastid	76.4	74.32
Os02t0701600-01	Rice	plastid	75.56	74.31
TraesCS6D01G245200.1	Wheat	plastid	76.12	74.25
HORVU6Hr1G068410.1	Barley	plastid	74.72	72.09
KRH23974	Soybean	cytosol	59.83	71.96
KRH39821	Soybean	cytosol	60.39	71.19
PGSC0003DMT400006168	Potato	cytosol	61.52	70.65
Bra022503.1-P	Field mustard	cytosol	51.69	69.7
KXG22885	Sorghum	endoplasmic reticulum	66.29	69.62
CDX91533	Canola	cytosol	51.12	68.94
TraesCS6B01G297000.1	Wheat	plastid	71.91	67.55
VIT_16s0039g01410.t01	Wine grape	plastid	63.76	65.8
Bra008507.1-P	Field mustard	cytosol	56.46	65.26
GSMUA_Achr1P27850_001	Banana	plastid	62.64	64.27
KRH23976	Soybean	plastid	61.8	62.86
Solyc08g076360.2.1	Tomato	plastid	63.76	61.52
CDY37556	Canola	plastid	58.99	60.52
CDY16380	Canola	plastid	59.83	60.51
CDY56135	Canola	plastid	58.43	59.94
AT1G64970.1	Thale cress	plastid	57.58	58.91
KXG34662	Sorghum	cytosol	17.13	17.73
KXG22604	Sorghum	cytosol	17.13	17.73
EER93245	Sorghum	cytosol	17.42	17.71
EER95554	Sorghum	extracellular, golgi	17.98	17.44
EER90688	Sorghum	cytosol	16.29	17.21
KXG37308	Sorghum	cytosol	16.85	17.05

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	UniProt:A0A194YRW3	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740
GO:GO:0032259	GO:GO:0051741	InterPro:IPR025774	EnsemblPlants:KXG30932	ProteinID:KXG30932	ProteinID:KXG30932.1
InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25
InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3004G269800	SUPFAM:SSF53335	UniParc:UPI0007F227B0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:61388484..61392276

Molecular Weight (calculated)

38646.3 Da

IEP (calculated)

8.384

GRAVY (calculated)

-0.240

Length

356 amino acids

Sequence
(BLAST)

001: MAHATLLHCS QSSTSPLACR RGSHYYYRAP SHVPRRSRPR GRGGVVSLRP MASSTAAQPP APAPPGLKEG IAGLYDESSG LWENIWGDHM HHGFYDSGEA
101: ASMADHRRAQ IRMIEEALAF AAVPSPDDPE KAPKTIVDVG CGIGGSSRYL AKKYGAQCKG ITLSPVQAER GNALAAAQGL SDQVTLQVAD ALEQPFPDGQ
201: FDLVWSMESG EHMPDKRKFV SELARVAAPG GTIIIVTWCH RNLEPSETSL KPDELSLLKR ICDAYYLPDW CSPSDYVNIA KSLSLEDIKA ADWSENVAPF
301: WPAVIKSALT WKGLTSLLTS GWKTIRGAMV MPLMIQGYKK GLIKFTIITC RKPGAA

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.