CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37308	Sorghum	cytosol	86.29	85.8
EER90688	Sorghum	cytosol	79.71	82.79
Os03t0807600-00	Rice	plasma membrane	51.14	68.58
KXG34662	Sorghum	cytosol	63.14	64.24
KXG22604	Sorghum	cytosol	62.86	63.95
HORVU5Hr1G109840.6	Barley	cytosol	52.29	61.82
Os11t0296900-00	Rice	cytosol	33.14	61.05
TraesCS5D01G469400.1	Wheat	nucleus, peroxisome, plastid	60.86	57.41
Zm00001d013037_P003	Maize	cytosol	48.57	54.31
Zm00001d044846_P001	Maize	cytosol	21.14	52.11
EER95554	Sorghum	extracellular, golgi	33.43	31.88
OQU83859	Sorghum	cytosol	17.71	20.46
KXG22885	Sorghum	endoplasmic reticulum	17.43	17.99
KXG30932	Sorghum	plastid	17.71	17.42

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	UniProt:C5WW54	EnsemblPlants:EER93245	ProteinID:EER93245	ProteinID:EER93245.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009058	GO:GO:0016020	GO:GO:0016740	GO:GO:0016787	GO:GO:0032259	GO:GO:0047372
InterPro:IPR030384	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685
PANTHER:PTHR44068	PANTHER:PTHR44068:SF2	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G046700	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C
UniParc:UPI00081ABDC3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:3450520..3454989

Molecular Weight (calculated)

39227.0 Da

IEP (calculated)

6.241

GRAVY (calculated)

-0.158

Length

350 amino acids

Sequence
(BLAST)

001: MSGALDLARS MGGSIDKDQV KSAVDQYLKY HDLHGGEQES RKSNYTDLVN KYYDLATGFY EYVWGDSIHF AGRYPGDTFR EGIKRHQHFM ALQLGLKKGM
101: KVLDVGCGIG GPLIEIARFS SALITGLNYN DYQISRGKEL IFSAGLSEQC CFLKGDFMNM PIADNTFDAA YAIEATCHAP DAVCVYSEVY RVLKPGQYFA
201: LDEWCLTDRF DPNNAKHLAI KAEIELGDGL PDIRTTHQCV QAMKDAGFEV IFTRDLAEDF PCPWYQMLVP NDFSWKRFRL TRLGRIVTRA IISTLEFFHI
301: APAGSMGVYN FMLTASEGLL KGGQEGIFSP AFFVLGRKPL KETEIVKGNL

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.