Factsheet for Zm00001d013037_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044846_P001	Maize	cytosol	38.66	85.21
Zm00001d013035_P004	Maize	cytosol	59.74	52.68
EER93245	Sorghum	cytosol	54.31	48.57
Os03t0807600-00	Rice	plasma membrane	38.34	45.98
Os11t0296900-00	Rice	cytosol	25.24	41.58
HORVU5Hr1G109840.6	Barley	cytosol	36.1	38.18
TraesCS5D01G469400.1	Wheat	nucleus, peroxisome, plastid	43.45	36.66
Zm00001d019139_P013	Maize	cytosol	35.46	26.62
Zm00001d027548_P001	Maize	plasma membrane	26.84	22.64
Zm00001d048356_P001	Maize	plasma membrane	26.2	22.16
Zm00001d017746_P001	Maize	plastid	13.42	11.93
Zm00001d036295_P001	Maize	cytosol	3.51	8.15
Zm00001d020855_P001	Maize	cytosol	2.88	6.67

Protein Annotations

Gene3D:3.40.50.150	MapMan:50.2.1	UniProt:A0A1D6GF62	ProteinID:AQK62209.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058
GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241
PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
InterPro:Sterol_MeTrfase_C	UniParc:UPI0008446374	EnsemblPlantsGene:Zm00001d013037	EnsemblPlants:Zm00001d013037_P003	EnsemblPlants:Zm00001d013037_T003	:

Description

Cycloartenol-C-24-methyltransferase 1

Coordinates

chr5:+:3579930..3583194

Molecular Weight (calculated)

34600.0 Da

IEP (calculated)

6.086

GRAVY (calculated)

-0.127

Length

313 amino acids

Sequence
(BLAST)

001: MDPPRGGAST SSELEKHSSG SVSLYVKYHD LHGGEQESRK SNYADLVVFC LHPTLINCYI VYLKVYQGFT LGITYAQFPT HIRCISVEMP SCSRSQFCST
101: SITGLTNNDY HVSRGKVCNL AFFLEYKNCI AYGYAPFNFW LQEHIFSAGL SEQCCSLKGD FMNMPIADNT FDAAYAIQAT CYAPEAQGVY SEVYRVLKPG
201: QYFALDEWCL TDRFDPNNAK HLTAKAEIEL GDGLPDIRTT RQCVQAMKDA GFEVNTLEFL RIAPAGSVGA YNVLTSASDG LLKGGREGIF TASFFVLGRK
301: PLKESEIVNG GNL

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.