Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0807600-00 | Rice | plasma membrane | 63.68 | 46.36 |
| HORVU5Hr1G109840.6 | Barley | cytosol | 58.95 | 37.84 |
| EER90688 | Sorghum | cytosol | 62.63 | 35.31 |
| Zm00001d013035_P004 | Maize | cytosol | 62.11 | 33.24 |
| KXG37308 | Sorghum | cytosol | 61.58 | 33.24 |
| EER93245 | Sorghum | cytosol | 61.05 | 33.14 |
| Os07t0206700-01 | Rice | cytosol, plasma membrane | 57.37 | 31.69 |
| TraesCS5D01G469400.1 | Wheat | nucleus, peroxisome, plastid | 60.0 | 30.73 |
| Zm00001d013037_P003 | Maize | cytosol | 41.58 | 25.24 |
| Zm00001d044846_P001 | Maize | cytosol | 18.42 | 24.65 |
| Os03t0136200-01 | Rice | extracellular | 36.32 | 19.01 |
| Os02t0701600-01 | Rice | plastid | 24.21 | 12.71 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | UniProt:A0A0P0Y1E1 | ProteinID:BAT13663.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | InterPro:IPR030384 |
| InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | EnsemblPlantsGene:Os11g0296900 | EnsemblPlants:Os11t0296900-00 | PFAM:PF08241 | PFscan:PS51685 |
| PANTHER:PTHR44068 | PANTHER:PTHR44068:SF2 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI000393A019 | : |
Description
Similar to Cyclopropane-fatty-acyl-phospholipid synthase family protein, expressed. (Os11t0296900-00)
Coordinates
chr11:-:10918543..10919959
Molecular Weight (calculated)
21403.8 Da
IEP (calculated)
6.498
GRAVY (calculated)
-0.117
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MFISDPNILY TRKNKMLENL CTDGFQVVIS FVCLNLFFRW HGETLRESLK RREHFLALQL GLKKGMKVLD VGCGIGGPLR EIARFSSASV TGLNNNDYQI
101: SRGQELNFSV GLSETCNYVK GDFMNMPIPD CTFDAAYALD ATCHAPDAVG VYSEIFRVLK PGKLFAMDEW CLTDKYDPDN ARHLSIKGEL
101: SRGQELNFSV GLSETCNYVK GDFMNMPIPD CTFDAAYALD ATCHAPDAVG VYSEIFRVLK PGKLFAMDEW CLTDKYDPDN ARHLSIKGEL
001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE
Arabidopsis Description
SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.