CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37556	Canola	plastid	98.56	98.56
Bra008507.1-P	Field mustard	cytosol	81.56	91.88
CDX91533	Canola	cytosol	69.74	91.67
CDY16380	Canola	plastid	91.35	90.06
AT1G64970.1	Thale cress	plastid	79.54	79.31
KRH23974	Soybean	cytosol	60.81	71.28
KRH39821	Soybean	cytosol	61.38	70.53
PGSC0003DMT400006168	Potato	cytosol	58.21	65.16
VIT_16s0039g01410.t01	Wine grape	plastid	63.11	63.48
KRH23976	Soybean	plastid	63.69	63.14
GSMUA_Achr1P27850_001	Banana	plastid	60.23	60.23
Os02t0701600-01	Rice	plastid	62.25	59.67
Zm00001d017746_P001	Maize	plastid	59.65	58.81
KXG30932	Sorghum	plastid	59.94	58.43
OQU83859	Sorghum	cytosol	51.01	58.42
TraesCS6D01G245200.1	Wheat	plastid	60.52	57.53
TraesCS6A01G269700.1	Wheat	plastid	60.52	57.38
HORVU6Hr1G068410.1	Barley	plastid	60.23	56.64
Solyc08g076360.2.1	Tomato	plastid	60.23	56.64
TraesCS6B01G297000.1	Wheat	plastid	59.37	54.35
KXG22885	Sorghum	endoplasmic reticulum	51.87	53.1
CDY71885	Canola	extracellular	18.73	18.26
CDY51340	Canola	extracellular	18.44	17.98
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.0	16.34
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	16.71	16.11
CDX91102	Canola	mitochondrion, plastid	17.0	15.49

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	GO:A0A078IWP1	UniProt:A0A078IWP1	EnsemblPlants:CDY56135	ProteinID:CDY56135
ProteinID:CDY56135.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009058	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740	GO:GO:0032259	GO:GO:0051741
EnsemblPlantsGene:GSBRNA2T00017871001	InterPro:IPR025774	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581
PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniPathway:UPA00160	UniParc:UPI0001704CF4
SEG:seg	:	:	:	:	:

Description

BnaA02g20230DBnaA02g20230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWP1]

Coordinates

chrLK033462:-:34618..37816

Molecular Weight (calculated)

38264.9 Da

IEP (calculated)

7.532

GRAVY (calculated)

-0.146

Length

347 amino acids

Sequence
(BLAST)

001: MKATLAPPSS LISLPRHKVS SLRSPSLLLQ SQRRSSALMT TTASRGSVAV TAAATSSAEA LREGIAEFYN ETSGLWEEIW GDHMHHGFYD PDSSVQLSDS
101: GHREAQIRMI EESLRFAGVT EEEKKIKRVV DVGCGIGGSS RYIASKFGAE CIGITLSPVQ AKRANDLATA QSLSHKVSFQ VADALDQPFE DGISDLVWSM
201: ESGEHMPDKA KFVKELVRVT APGGRIIIVT WCHRNLSQGE ESLQPWEQNL LDRICKTFYL PAWCSTTDYV ELLQSLSLQD IKYADWSENV APFWPAVIRT
301: ALTWKGLVSL LRSGMKSIKG ALTMPLMIEG YKKGVIKFGI ITCQKPL

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.