Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71885 | Canola | extracellular | 98.88 | 98.88 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 98.6 | 98.6 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 92.13 | 90.86 |
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 84.83 | 83.89 |
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 84.27 | 83.1 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 83.99 | 83.06 |
| KRH60980 | Soybean | endoplasmic reticulum | 83.99 | 82.83 |
| KRH51652 | Soybean | endoplasmic reticulum | 83.71 | 82.09 |
| Solyc01g111830.2.1 | Tomato | nucleus | 79.49 | 79.05 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 78.65 | 78.21 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 77.53 | 77.31 |
| Solyc10g055680.1.1 | Tomato | extracellular | 75.28 | 75.07 |
| PGSC0003DMT400093662 | Potato | cytosol | 67.42 | 73.62 |
| Solyc05g008680.1.1 | Tomato | extracellular | 71.35 | 69.97 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 33.99 | 69.14 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 69.38 | 67.86 |
| Zm00001d048356_P001 | Maize | plasma membrane | 70.51 | 67.84 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 69.38 | 67.67 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 69.1 | 67.58 |
| EER95554 | Sorghum | extracellular, golgi | 69.66 | 67.57 |
| Os03t0136200-01 | Rice | extracellular | 68.82 | 67.49 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 69.66 | 66.85 |
| Zm00001d027548_P001 | Maize | plasma membrane | 69.66 | 66.85 |
| Zm00001d020855_P001 | Maize | cytosol | 25.28 | 66.67 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 67.42 | 66.12 |
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 67.42 | 66.12 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 67.42 | 66.12 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 67.13 | 65.84 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 32.87 | 65.73 |
| Zm00001d036295_P001 | Maize | cytosol | 24.72 | 65.19 |
| CDX91102 | Canola | mitochondrion, plastid | 35.96 | 33.6 |
| CDX91533 | Canola | cytosol | 17.98 | 24.24 |
| CDY16380 | Canola | plastid | 18.82 | 19.03 |
| CDY37556 | Canola | plastid | 18.54 | 19.02 |
| CDY56135 | Canola | plastid | 17.98 | 18.44 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | GO:A0A078IJW8 | UniProt:A0A078IJW8 | EnsemblPlants:CDY51340 | ProteinID:CDY51340 |
| ProteinID:CDY51340.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006694 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0032259 | EnsemblPlantsGene:GSBRNA2T00003237001 | InterPro:IPR030384 | InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 |
| PFAM:PF08241 | PFAM:PF08498 | PFscan:PS51685 | PANTHER:PTHR44742 | PANTHER:PTHR44742:SF1 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | UniParc:UPI0004EEF54E | : | : |
Description
BnaCnng20770DMethyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078IJW8]
Coordinates
chrLK032986:-:75756..76908
Molecular Weight (calculated)
39950.9 Da
IEP (calculated)
7.048
GRAVY (calculated)
-0.219
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGVAFFFTG ALVAGGIYWF LCVLGPAERK GKRALDLSGG SISAEKVQDK YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIR
101: GKSHRDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVK RARDHNRKAG LDALCEVVCG NFLQMPFDDN TFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSLYVSYEWV TTDKFNAEDE EHVEVIQGIE RGDALPGLRA YSDIAQAAKK VGFQIVKEKD LAAPPAQPWW TRLKMGRLAY
301: WRNHVVVQIL SAVGVAPKGT VDVHEMLFKT ADFLSRGGET EIFSPMHMIL CRKPMS
101: GKSHRDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVK RARDHNRKAG LDALCEVVCG NFLQMPFDDN TFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSLYVSYEWV TTDKFNAEDE EHVEVIQGIE RGDALPGLRA YSDIAQAAKK VGFQIVKEKD LAAPPAQPWW TRLKMGRLAY
301: WRNHVVVQIL SAVGVAPKGT VDVHEMLFKT ADFLSRGGET EIFSPMHMIL CRKPMS
001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
Arabidopsis Description
SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.