Factsheet for HORVU1Hr1G052620.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 3
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G208000.1	Wheat	endoplasmic reticulum	99.45	99.45
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	99.17	99.17
TraesCS1A01G204700.1	Wheat	endoplasmic reticulum, extracellular	98.9	98.9
Os03t0136200-01	Rice	extracellular	87.33	87.33
EER95554	Sorghum	extracellular, golgi	87.05	86.1
Zm00001d048356_P001	Maize	plasma membrane	87.05	85.41
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	86.23	84.37
Zm00001d027548_P001	Maize	plasma membrane	85.95	84.1
Zm00001d036295_P001	Maize	cytosol	29.2	78.52
GSMUA_Achr4P29480_001	Banana	cytosol	37.74	76.97
GSMUA_Achr4P25540_001	Banana	cytosol	36.64	76.0
Zm00001d020855_P001	Maize	cytosol	27.82	74.81
VIT_03s0038g02920.t01	Wine grape	extracellular	68.87	70.22
KRH60980	Soybean	endoplasmic reticulum	68.87	69.25
KRH51652	Soybean	endoplasmic reticulum	68.87	68.87
PGSC0003DMT400047969	Potato	endoplasmic reticulum, plasma membrane	67.49	68.44
Solyc01g111830.2.1	Tomato	nucleus	67.49	68.44
PGSC0003DMT400093662	Potato	cytosol	60.88	67.79
VIT_18s0001g00810.t01	Wine grape	plasma membrane	66.94	67.5
Bra025811.1-P	Field mustard	extracellular, golgi	66.12	67.42
CDY71885	Canola	extracellular	66.12	67.42
AT1G20330.1	Thale cress	endoplasmic reticulum, golgi	66.94	67.31
CDY51340	Canola	extracellular	65.84	67.13
Solyc10g055680.1.1	Tomato	extracellular	65.01	66.11
PGSC0003DMT400048727	Potato	endoplasmic reticulum, vacuole	65.01	66.11
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.91	64.44
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.91	64.27
AT1G76090.1	Thale cress	endoplasmic reticulum, plasma membrane	63.36	64.07
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	63.64	63.99
Solyc05g008680.1.1	Tomato	extracellular	63.36	63.36
HORVU5Hr1G109840.6	Barley	cytosol	29.2	35.81
HORVU4Hr1G084000.2	Barley	plastid	34.99	30.98
HORVU6Hr1G068410.1	Barley	plastid	17.63	17.34

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:HORVU1Hr1G052620	EnsemblPlants:HORVU1Hr1G052620.1	InterPro:IPR030384	UniProt:M0Z1Y6	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11
PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44742	PANTHER:PTHR44742:SF2	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	TMHMM:TMhelix	UniParc:UPI0002962BFD	SEG:seg	:

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:M0Z1Y6]

Coordinates

chrchr1H:-:389943128..389944980

Molecular Weight (calculated)

40354.2 Da

IEP (calculated)

6.651

GRAVY (calculated)

-0.160

Length

363 amino acids

Sequence
(BLAST)

001: MEPATMAWTL AAAGFALVYW FVWVMGAAEV QGKRAVDLQM GSIADDKVGD RYSQYWSFFR SPKETAAAAT ADKVPAFVDT FYNLVTDIYE WGWGQSFHFS
101: PSLPGRSHRE ATRVHEERVA DLLEARPGKR LLDVGCGVGG PMRAIAAHSG SDVVGITINE YQVNRARSHN RKAGLDKQCE VVCGNFMAMP FPDASFDGAY
201: SIEATCHAPR LQDVYGEVFR VLKPGGLYVS YEWVTTPLYR ADDPEHVEAI HGIERGDALP GLRRQDEIAT VAKEVGFDVV KELDLALPPA LPWWTRLKMG
301: RLSYWRNSLV IRALTLLRVA PKGVSEVHEM LYETAHHLTR GGETGIFTPM HMVLLRKPAT AAE

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.