Factsheet for HORVU4Hr1G084000.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G510200.1	Wheat	cytosol	82.44	98.26
TraesCS4D01G336800.1	Wheat	cytosol	82.44	98.26
TraesCS4B01G340700.1	Wheat	golgi	82.44	98.26
KXG34662	Sorghum	cytosol	78.78	93.9
KXG22604	Sorghum	cytosol	78.29	93.31
Os07t0206700-01	Rice	cytosol, plasma membrane	77.07	91.86
GSMUA_Achr3P29670_001	Banana	cytosol	66.83	79.42
Solyc01g087560.2.1	Tomato	cytosol	66.83	79.19
PGSC0003DMT400017668	Potato	cytosol	66.83	79.19
Bra006211.1-P	Field mustard	cytosol	65.61	78.66
GSMUA_Achr4P03610_001	Banana	cytosol	66.1	78.55
VIT_08s0007g08470.t01	Wine grape	cytosol	65.12	77.84
KRH13976	Soybean	endoplasmic reticulum	64.15	77.35
KRH32972	Soybean	cytosol	64.15	77.35
AT5G13710.1	Thale cress	cytosol	63.17	77.08
KRH23899	Soybean	cytosol	62.44	75.29
GSMUA_Achr4P13850_001	Banana	cytosol	60.24	73.08
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	67.56	71.95
KRH23897	Soybean	endoplasmic reticulum	58.78	70.88
Zm00001d019139_P013	Maize	cytosol	71.71	70.5
VIT_13s0064g00440.t01	Wine grape	plastid	68.78	68.61
CDX91102	Canola	mitochondrion, plastid	63.66	68.5
HORVU5Hr1G109840.6	Barley	cytosol	48.29	66.89
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	30.98	34.99
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	30.0	33.15
HORVU6Hr1G068410.1	Barley	plastid	15.12	16.8

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	UniProt:A0A287PX74	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740
GO:GO:0032259	EnsemblPlantsGene:HORVU4Hr1G084000	EnsemblPlants:HORVU4Hr1G084000.2	InterPro:IPR030384	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11
PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF3	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI000B464F30	SEG:seg	:	:

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A287PX74]

Coordinates

chrchr4H:+:627060580..627067109

Molecular Weight (calculated)

45531.1 Da

IEP (calculated)

6.978

GRAVY (calculated)

-0.387

Length

410 amino acids

Sequence
(BLAST)

001: ARLALLCPVS RPPTCNPSAA SQIASSVPPA ELRPPPPADT SRSPPPNTVA RFPFPLHQAP PVAAAAMSKS GALDLASGLG GKIDKEQVKS AVDEYEKYHG
101: YYGGKEESRK SNYTDMVNKY YDLATSFYEY GWGESFHFAH RWSGESLRES IKRHEHFLAL QLELKPGMKV LDVGCGIGGP LREIARFSST SVTGLNNNDY
201: QITRGKELNR SVGLSGTCDF VKADFMKMPF SDNTFDAVYA IEATCHAPDP VGCYKEIYRV LKPGQCFAVY EWCITDHYDP NNATHKRIKD EIELGNGLPD
301: IRSTRQCLQA VKDAGFEVIW DKDLAEDSPL PWYLPLDPSR FSLSSFRLTT MGRIITRNMV KALEYVGLAP EGSQRVSSFL EKAAEGLVEG GKKEIFTPMY
401: FFVVRKPLSE

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.