Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 95.96 | 97.53 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 95.69 | 97.53 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 95.42 | 97.25 |
| Zm00001d048356_P001 | Maize | plasma membrane | 88.41 | 88.65 |
| Os03t0136200-01 | Rice | extracellular | 86.52 | 88.43 |
| EER95554 | Sorghum | extracellular, golgi | 87.33 | 88.28 |
| Zm00001d027548_P001 | Maize | plasma membrane | 87.6 | 87.6 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 84.37 | 86.23 |
| Zm00001d036295_P001 | Maize | cytosol | 31.0 | 85.19 |
| Zm00001d020855_P001 | Maize | cytosol | 29.38 | 80.74 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 35.85 | 76.0 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 35.58 | 74.16 |
| VIT_03s0038g02920.t01 | Wine grape | extracellular | 69.0 | 71.91 |
| Solyc01g111830.2.1 | Tomato | nucleus | 68.19 | 70.67 |
| KRH60980 | Soybean | endoplasmic reticulum | 68.19 | 70.08 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 67.39 | 70.03 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 67.12 | 69.94 |
| CDY71885 | Canola | extracellular | 67.12 | 69.94 |
| CDY51340 | Canola | extracellular | 66.85 | 69.66 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 67.12 | 69.55 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 67.66 | 69.53 |
| KRH51652 | Soybean | endoplasmic reticulum | 67.92 | 69.42 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 67.12 | 69.17 |
| PGSC0003DMT400093662 | Potato | cytosol | 60.65 | 69.02 |
| Solyc10g055680.1.1 | Tomato | extracellular | 66.04 | 68.63 |
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 65.5 | 67.5 |
| Bra015789.1-P | Field mustard | endoplasmic reticulum, extracellular | 65.5 | 67.31 |
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 64.96 | 66.76 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 63.34 | 65.46 |
| Solyc05g008680.1.1 | Tomato | extracellular | 63.34 | 64.74 |
| HORVU5Hr1G109840.6 | Barley | cytosol | 28.03 | 35.14 |
| HORVU4Hr1G084000.2 | Barley | plastid | 33.15 | 30.0 |
| HORVU6Hr1G068410.1 | Barley | plastid | 17.25 | 17.34 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | UniProt:A0A287PU65 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | EnsemblPlantsGene:HORVU4Hr1G080780 |
| EnsemblPlants:HORVU4Hr1G080780.1 | InterPro:IPR030384 | InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | PFAM:PF08241 | PFAM:PF08498 |
| PFscan:PS51685 | PANTHER:PTHR44742 | PANTHER:PTHR44742:SF2 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C |
| TMHMM:TMhelix | UniParc:UPI00042D5867 | SEG:seg | : | : | : |
Description
Methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A287PU65]
Coordinates
chrchr4H:+:617388840..617391479
Molecular Weight (calculated)
41412.5 Da
IEP (calculated)
6.845
GRAVY (calculated)
-0.176
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPATMAWTA GLVGAGLVYW FVWVMGAAEV KGKRAVDLKM GSITRDKVQD KYTQYWSFFR RPKETATTQA SADKVPAFVD TFYNLVTDIY EWGWGQSFHF
101: SPSLPGRSHR DATRVHEERV ADLLAARPGH RVLDVGCGVG GPMRAIAAHS GAHVVGITIN EYQVNRARAH NRKARLDAQC EVVCGNFMAM PFDDASFDGA
201: YSIEATCHAP RLQDVYAEVY RVLKPGRLYV SYEWVTTPLF RADDPAHVEA IHGIERGDAL PGLRRQDEIA SIAQEVGFEV VQELDLALPP SLPWWTRLKM
301: GRLAYWRNSL VVRVLTLLRI APKGVVEVHE MLYETAQHLT LGGETGIFSP MHMVVLRKPA DADAEAEESS K
101: SPSLPGRSHR DATRVHEERV ADLLAARPGH RVLDVGCGVG GPMRAIAAHS GAHVVGITIN EYQVNRARAH NRKARLDAQC EVVCGNFMAM PFDDASFDGA
201: YSIEATCHAP RLQDVYAEVY RVLKPGRLYV SYEWVTTPLF RADDPAHVEA IHGIERGDAL PGLRRQDEIA SIAQEVGFEV VQELDLALPP SLPWWTRLKM
301: GRLAYWRNSL VVRVLTLLRI APKGVVEVHE MLYETAQHLT LGGETGIFSP MHMVVLRKPA DADAEAEESS K
001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
Arabidopsis Description
SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.