Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 89.69 | 89.2 |
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 88.86 | 88.61 |
| Bra015789.1-P | Field mustard | endoplasmic reticulum, extracellular | 88.58 | 88.09 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 83.01 | 82.55 |
| KRH51652 | Soybean | endoplasmic reticulum | 81.34 | 80.44 |
| KRH60980 | Soybean | endoplasmic reticulum | 80.5 | 80.06 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 79.67 | 79.44 |
| Solyc01g111830.2.1 | Tomato | nucleus | 77.16 | 77.37 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 77.16 | 77.37 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 76.6 | 77.03 |
| Solyc10g055680.1.1 | Tomato | extracellular | 75.77 | 76.19 |
| PGSC0003DMT400093662 | Potato | cytosol | 67.41 | 74.23 |
| Solyc05g008680.1.1 | Tomato | extracellular | 69.64 | 68.87 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 32.87 | 67.43 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 66.3 | 65.38 |
| Os03t0136200-01 | Rice | extracellular | 66.02 | 65.29 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 32.31 | 65.17 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 66.02 | 65.11 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 66.02 | 64.93 |
| Zm00001d048356_P001 | Maize | plasma membrane | 66.3 | 64.32 |
| EER95554 | Sorghum | extracellular, golgi | 65.74 | 64.31 |
| Zm00001d020855_P001 | Maize | cytosol | 23.96 | 63.7 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 64.35 | 63.64 |
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 64.35 | 63.64 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 64.35 | 63.64 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 64.07 | 63.36 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 65.46 | 63.34 |
| Zm00001d027548_P001 | Maize | plasma membrane | 65.18 | 63.07 |
| Zm00001d036295_P001 | Maize | cytosol | 23.12 | 61.48 |
| AT5G13710.1 | Thale cress | cytosol | 36.49 | 38.99 |
| AT1G64970.1 | Thale cress | plastid | 16.43 | 16.95 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | EntrezGene:843941 | UniProt:A0A178WGT2 | EMBL:AC009978 | ProteinID:AEE35795.1 |
| EMBL:AF375397 | ArrayExpress:AT1G76090 | EnsemblPlantsGene:AT1G76090 | RefSeq:AT1G76090 | TAIR:AT1G76090 | RefSeq:AT1G76090-TAIR-G |
| EnsemblPlants:AT1G76090.1 | TAIR:AT1G76090.1 | EMBL:AY113031 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003838 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 |
| GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008202 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016740 | GO:GO:0030797 | GO:GO:0032259 |
| InterPro:IPR030384 | InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | RefSeq:NP_177736.1 | ProteinID:OAP16673.1 | PFAM:PF08241 |
| PFAM:PF08498 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025181 | PO:PO:0025281 |
| PFscan:PS51685 | PANTHER:PTHR44742 | PANTHER:PTHR44742:SF1 | UniProt:Q94JS4 | InterPro:SAM-dependent_MTases | Symbol:SMT3 |
| SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | EMBL:U71400 | UniParc:UPI000004848E | : |
Description
SMT324-methylenesterol C-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94JS4]
Coordinates
chr1:-:28550202..28551836
Molecular Weight (calculated)
40126.2 Da
IEP (calculated)
8.059
GRAVY (calculated)
-0.293
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSVALYCTA GLIAGAVYWF ICVLGPAERK GKRASDLSGG SISAEKVKDN YNQYWSFFRK PKEIESAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPHVP
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.