Factsheet for PGSC0003DMT400048727

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 6
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g055680.1.1	Tomato	extracellular	94.68	94.68
PGSC0003DMT400047969	Potato	endoplasmic reticulum, plasma membrane	83.47	83.24
VIT_03s0038g02920.t01	Wine grape	extracellular	80.11	80.34
VIT_18s0001g00810.t01	Wine grape	plasma membrane	80.11	79.44
AT1G20330.1	Thale cress	endoplasmic reticulum, golgi	79.83	78.95
KRH60980	Soybean	endoplasmic reticulum	79.83	78.95
PGSC0003DMT400093662	Potato	cytosol	71.99	78.83
KRH51652	Soybean	endoplasmic reticulum	80.11	78.79
Bra025811.1-P	Field mustard	extracellular, golgi	77.87	78.09
CDY71885	Canola	extracellular	77.59	77.81
CDY51340	Canola	extracellular	77.31	77.53
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	78.15	77.5
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	77.87	77.01
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	77.59	76.73
AT1G76090.1	Thale cress	endoplasmic reticulum, plasma membrane	77.03	76.6
GSMUA_Achr4P25540_001	Banana	cytosol	34.17	69.71
TraesCS4B01G332600.1	Wheat	endoplasmic reticulum, extracellular	70.59	69.23
TraesCS5A01G503700.1	Wheat	endoplasmic reticulum, extracellular	70.31	68.77
TraesCS4D01G329300.1	Wheat	endoplasmic reticulum, extracellular	70.03	68.68
Os03t0136200-01	Rice	extracellular	69.47	68.32
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	70.03	67.39
EER95554	Sorghum	extracellular, golgi	69.19	67.3
Zm00001d048356_P001	Maize	plasma membrane	69.47	67.03
Zm00001d036295_P001	Maize	cytosol	25.21	66.67
Zm00001d027548_P001	Maize	plasma membrane	68.91	66.31
GSMUA_Achr4P29480_001	Banana	cytosol	32.77	65.73
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	66.39	65.29
TraesCS1A01G204700.1	Wheat	endoplasmic reticulum, extracellular	66.39	65.29
TraesCS1D01G208000.1	Wheat	endoplasmic reticulum	66.11	65.01
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	66.11	65.01
Zm00001d020855_P001	Maize	cytosol	24.37	64.44
PGSC0003DMT400017668	Potato	cytosol	38.66	39.88
PGSC0003DMT400006168	Potato	cytosol	17.93	20.65

Protein Annotations

EntrezGene:102589166	Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740
GO:GO:0032259	InterPro:IPR030384	UniProt:M1BMT8	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241
PFAM:PF08498	EnsemblPlantsGene:PGSC0003DMG400018937	PGSC:PGSC0003DMG400018937	EnsemblPlants:PGSC0003DMT400048727	PFscan:PS51685	PANTHER:PTHR44742
PANTHER:PTHR44742:SF1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	TMHMM:TMhelix	UniParc:UPI000296EA11
RefSeq:XP_006360893.1	:	:	:	:	:

Description

S-adenosyl-methionine-sterol-C-methyltransferase homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400018937]

Coordinates

chr10:-:47521982..47523316

Molecular Weight (calculated)

40117.9 Da

IEP (calculated)

6.014

GRAVY (calculated)

-0.222

Length

357 amino acids

Sequence
(BLAST)

001: MDSLALFATA SLIAVSLYWF VCILGSAEQK GKRAVELSGG SIAKENVQDK YKQYWSFFRR PKEIETTENV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSDRECTRI HEERAVDLLG VKPGARVLDA GCGVGGPMRA IAAHSGANIV GITINEYQVN RARLHNKKAG LDSLCEVVCG NFLEMPFDDN SFDGVYSIEA
201: TCHAPKLEEV YREIYRVLKP GSLYVSYEWV TTELFNSDDP EHVEIIHGIE RGDALPGLRK YSDIFQVAKK VGFEVVDEKD LAKPPSNPWW TRLQMGKIAY
301: WRNHIVVTVL SWLGIAPKGT VDVHKMLVET ADYLAKGGDK GIFSPMHMIL CRKPEEN

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.