Factsheet for Solyc10g055680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048727	Potato	endoplasmic reticulum, vacuole	94.68	94.68
Solyc01g111830.2.1	Tomato	nucleus	82.63	82.4
VIT_03s0038g02920.t01	Wine grape	extracellular	78.99	79.21
AT1G20330.1	Thale cress	endoplasmic reticulum, golgi	78.71	77.84
KRH60980	Soybean	endoplasmic reticulum	78.43	77.56
VIT_18s0001g00810.t01	Wine grape	plasma membrane	78.15	77.5
KRH51652	Soybean	endoplasmic reticulum	78.43	77.14
CDY71885	Canola	extracellular	75.91	76.12
AT1G76090.1	Thale cress	endoplasmic reticulum, plasma membrane	76.19	75.77
Bra025811.1-P	Field mustard	extracellular, golgi	75.35	75.56
CDY51340	Canola	extracellular	75.07	75.28
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	75.91	75.28
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	75.63	74.79
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	75.35	74.52
Solyc05g008680.1.1	Tomato	extracellular	72.83	71.63
GSMUA_Achr4P25540_001	Banana	cytosol	34.45	70.29
Os03t0136200-01	Rice	extracellular	69.19	68.04
TraesCS4B01G332600.1	Wheat	endoplasmic reticulum, extracellular	69.19	67.86
TraesCS5A01G503700.1	Wheat	endoplasmic reticulum, extracellular	68.91	67.4
TraesCS4D01G329300.1	Wheat	endoplasmic reticulum, extracellular	68.63	67.31
EER95554	Sorghum	extracellular, golgi	68.63	66.76
GSMUA_Achr4P29480_001	Banana	cytosol	33.05	66.29
Zm00001d048356_P001	Maize	plasma membrane	68.63	66.22
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	68.63	66.04
Zm00001d036295_P001	Maize	cytosol	24.93	65.93
Zm00001d027548_P001	Maize	plasma membrane	68.07	65.5
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	66.39	65.29
TraesCS1A01G204700.1	Wheat	endoplasmic reticulum, extracellular	66.39	65.29
TraesCS1D01G208000.1	Wheat	endoplasmic reticulum	66.11	65.01
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	66.11	65.01
Zm00001d020855_P001	Maize	cytosol	24.09	63.7
Solyc01g087560.2.1	Tomato	cytosol	38.1	39.31
Solyc10g080150.1.1	Tomato	plastid	37.82	34.18
Solyc08g076360.2.1	Tomato	plastid	17.93	17.34

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008757	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384
UniProt:K4D1F8	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685
PANTHER:PTHR44742	PANTHER:PTHR44742:SF1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc10g055680.1	EnsemblPlants:Solyc10g055680.1.1
InterPro:Sterol_MeTrfase_C	TMHMM:TMhelix	UniParc:UPI00027695EE	:	:	:

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:K4D1F8]

Coordinates

chr10:-:57195284..57196357

Molecular Weight (calculated)

40069.0 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.225

Length

357 amino acids

Sequence
(BLAST)

001: MDALALFATV SLIAASLYWF ICIHGSAEQK GKRAVELSGG SIAKEKVEDN YKQYWSFFRR PKEIETTENV PAFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSDRECTRI HEQRAVDLLG VKPGARILDA GCGVGGPMRA IAAHSGANIV GITINEYQVN RARLHNKKAG LDSLCEVVCG NFLEMPFDDN SFDGVYSIEA
201: TCHAPKLEDV YREIYRVLKP GSMYVSYEWV TTELFNSDDP EHVAIIHGIE RGDALPGLRK HSDIYEVAKK VGFEVVDEKD LAKPPSNPWW TRLQMGKIAY
301: WRNHIVVTVL SWLGIAPKGT VDVHKMLVET ADYLAKGGDK GIFSPMHMIL CRKPEKH

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.