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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 3
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_08s0007g08470.t01 Wine grape cytosol 69.37 79.88
Solyc01g087560.2.1 Tomato cytosol 62.28 71.1
Solyc10g055680.1.1 Tomato extracellular 34.18 37.82
Solyc01g111830.2.1 Tomato nucleus 34.18 37.71
Solyc05g008680.1.1 Tomato extracellular 33.67 36.64
Solyc08g076360.2.1 Tomato plastid 15.19 16.26
Protein Annotations
Gene3D:3.40.50.150MapMan:5.5.1.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006629GO:GO:0006694GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0008757GO:GO:0009058GO:GO:0016740GO:GO:0032259InterPro:IPR030384
UniProt:K4D2Q6InterPro:MeTrfase_SMTInterPro:Methyltransf_11PFAM:PF08241PFAM:PF08498PFscan:PS51685
PANTHER:PTHR44068PANTHER:PTHR44068:SF3InterPro:SAM-dependent_MTasesSUPFAM:SSF53335EnsemblPlantsGene:Solyc10g080150.1EnsemblPlants:Solyc10g080150.1.1
InterPro:Sterol_MeTrfase_CUniParc:UPI000276932FSEG:seg:::
Description
Methyltransferase [Source:UniProtKB/TrEMBL;Acc:K4D2Q6]
Coordinates
chr10:-:61526826..61531375
Molecular Weight (calculated)
44625.3 Da
IEP (calculated)
8.139
GRAVY (calculated)
-0.400
Length
395 amino acids
Sequence
(BLAST)
001: MRASKLGVEI RKKKTKKKPR AYISSLPPSS GSLHNFNCRP NSSYLRLMSK SGTLDLASGV GGKIEKKEVL SAVEKYEKYH ACDGEAEEER KANYIDMVNK
101: YYDLATSFYE YGWGESFHFA PRWKGESLRE SIKRHEHFLA LQLGVKHGQK ILDVGCGIGG PLREIARFSD AYVTGINNNE YQVTRGKELN RIGGVDNTCN
201: YVKADFMSMP FADDSFDGIF AIEATCHAPN VFDCYKEIFR VLKPGQCFAN YEWCITDFFD PNNSNHRRIK REVELGNGLP DIRSMGECIE ALKHAGFEII
301: WDKDIAIDSP LPWYLPLDKS HFSLSNVRVT AFGRFFTRNM VKILERVGLA PEGSQKVQAM LEQAADALVE GGKEGIFTPM YFFLARKPAA IDPLT
Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)
001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE
Arabidopsis Description
SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.