Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 6
- extracellular 5
- vacuole 4
- plasma membrane 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71885 | Canola | extracellular | 91.41 | 92.7 |
| CDY51340 | Canola | extracellular | 90.86 | 92.13 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 90.58 | 91.85 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 86.43 | 86.67 |
| KRH51652 | Soybean | endoplasmic reticulum | 85.6 | 85.12 |
| KRH60980 | Soybean | endoplasmic reticulum | 85.04 | 85.04 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 82.55 | 83.01 |
| Solyc01g111830.2.1 | Tomato | nucleus | 81.72 | 82.4 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 80.33 | 81.01 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 78.95 | 79.83 |
| Solyc10g055680.1.1 | Tomato | extracellular | 77.84 | 78.71 |
| PGSC0003DMT400093662 | Potato | cytosol | 68.42 | 75.77 |
| Solyc05g008680.1.1 | Tomato | extracellular | 72.58 | 72.18 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 34.63 | 71.43 |
| EER95554 | Sorghum | extracellular, golgi | 70.08 | 68.94 |
| Zm00001d048356_P001 | Maize | plasma membrane | 70.64 | 68.92 |
| Os03t0136200-01 | Rice | extracellular | 69.25 | 68.87 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 69.25 | 68.68 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 69.25 | 68.68 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 69.25 | 68.49 |
| Zm00001d027548_P001 | Maize | plasma membrane | 69.81 | 67.92 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 69.53 | 67.66 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 67.87 | 67.49 |
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 67.87 | 67.49 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 33.24 | 67.42 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 67.59 | 67.22 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 67.31 | 66.94 |
| Zm00001d020855_P001 | Maize | cytosol | 24.38 | 65.19 |
| Zm00001d036295_P001 | Maize | cytosol | 24.1 | 64.44 |
| AT5G13710.1 | Thale cress | cytosol | 35.46 | 38.1 |
| AT1G64970.1 | Thale cress | plastid | 17.73 | 18.39 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | EntrezGene:838621 | UniProt:A0A178WHI4 | ProteinID:AAF88156.1 | ProteinID:AEE29962.1 |
| EMBL:AF332417 | ArrayExpress:AT1G20330 | EnsemblPlantsGene:AT1G20330 | RefSeq:AT1G20330 | TAIR:AT1G20330 | RefSeq:AT1G20330-TAIR-G |
| EnsemblPlants:AT1G20330.1 | TAIR:AT1G20330.1 | EMBL:AY046042 | EMBL:AY086699 | EMBL:AY113961 | EMBL:AY128389 |
| EMBL:BT000750 | EMBL:BT002093 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006629 | GO:GO:0006694 | GO:GO:0007049 | GO:GO:0007275 | GO:GO:0007389 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008202 | GO:GO:0008757 | GO:GO:0009058 | GO:GO:0009825 |
| GO:GO:0009987 | GO:GO:0010051 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016049 | GO:GO:0016126 |
| GO:GO:0016740 | GO:GO:0030797 | GO:GO:0032259 | GO:GO:0032876 | GO:GO:0040007 | InterPro:IPR030384 |
| InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | RefSeq:NP_173458.1 | ProteinID:OAP17839.1 | PFAM:PF08241 | PFAM:PF08498 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0006339 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 |
| PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025181 | PO:PO:0025281 | PFscan:PS51685 | PANTHER:PTHR44742 | PANTHER:PTHR44742:SF1 | UniProt:Q39227 |
| InterPro:SAM-dependent_MTases | Symbol:SMT2 | SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | UniParc:UPI0000048296 |
| EMBL:X89867 | : | : | : | : | : |
Description
SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
Coordinates
chr1:-:7038527..7040231
Molecular Weight (calculated)
40452.4 Da
IEP (calculated)
6.018
GRAVY (calculated)
-0.227
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.