Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g008680.1.1 | Tomato | extracellular | 95.09 | 85.4 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 38.65 | 72.0 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 78.83 | 71.99 |
| VIT_03s0038g02920.t01 | Wine grape | extracellular | 77.61 | 71.07 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 77.61 | 70.67 |
| KRH60980 | Soybean | endoplasmic reticulum | 76.99 | 69.53 |
| KRH51652 | Soybean | endoplasmic reticulum | 76.69 | 68.87 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 75.77 | 68.42 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 75.15 | 68.06 |
| CDY71885 | Canola | extracellular | 73.93 | 67.7 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 73.62 | 67.42 |
| CDY51340 | Canola | extracellular | 73.62 | 67.42 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 36.81 | 67.42 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 74.23 | 67.41 |
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.01 | 66.11 |
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.01 | 65.93 |
| Bra015789.1-P | Field mustard | endoplasmic reticulum, extracellular | 72.39 | 65.37 |
| Os03t0136200-01 | Rice | extracellular | 70.55 | 63.36 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 70.55 | 63.19 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 70.55 | 63.19 |
| EER95554 | Sorghum | extracellular, golgi | 70.86 | 62.94 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 69.63 | 62.19 |
| Zm00001d048356_P001 | Maize | plasma membrane | 70.25 | 61.89 |
| Zm00001d027548_P001 | Maize | plasma membrane | 70.25 | 61.73 |
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 68.1 | 61.16 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 68.1 | 61.16 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 67.79 | 60.88 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 67.79 | 60.88 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 69.02 | 60.65 |
| Zm00001d020855_P001 | Maize | cytosol | 23.62 | 57.04 |
| Zm00001d036295_P001 | Maize | cytosol | 23.31 | 56.3 |
| PGSC0003DMT400017668 | Potato | cytosol | 41.1 | 38.73 |
| PGSC0003DMT400006168 | Potato | cytosol | 21.17 | 22.26 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006694 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0032259 |
| InterPro:IPR030384 | UniProt:M1DSF8 | InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | PFAM:PF08241 | PFAM:PF08498 |
| EnsemblPlantsGene:PGSC0003DMG400043233 | PGSC:PGSC0003DMG400043233 | EnsemblPlants:PGSC0003DMT400093662 | PFscan:PS51685 | PANTHER:PTHR44742 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | UniParc:UPI0002968986 | : | : | : |
Description
S-adenosyl-methionine-sterol-C-methyltransferase homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400043233]
Coordinates
chr5:-:3655452..3656432
Molecular Weight (calculated)
36222.3 Da
IEP (calculated)
5.846
GRAVY (calculated)
-0.231
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQLSGGSL PKEKVQEGYD RYSSFFERGP NGNEMDSSDK VPALVDTFYD LVTDIYEWGW GQSFHFSPRI PGKSNRDATR IHEEMAVNLL NVEPGARVLD
101: VGCGVGGPMR AIAAHSGANV VGITINEYQV ERARAHNKKA GLDSMCEVVC GNFLKMPFDD NSFEGAYSIE ATCHAPKLEE VYGEIFRVLK PGSFYVSYEW
201: VTTELYNSDD PEHVEIVRGI ERGDALPGLR SYKDIAKIAT KVGFEVIKES NLAKPPAEPW WTRLKMGRIA YWRNHVVVTI LSWLGIAPKG VVDVHGMLLV
301: TADYLAKGGD TGIFTPMHMI LCRKPE
101: VGCGVGGPMR AIAAHSGANV VGITINEYQV ERARAHNKKA GLDSMCEVVC GNFLKMPFDD NSFEGAYSIE ATCHAPKLEE VYGEIFRVLK PGSFYVSYEW
201: VTTELYNSDD PEHVEIVRGI ERGDALPGLR SYKDIAKIAT KVGFEVIKES NLAKPPAEPW WTRLKMGRIA YWRNHVVVTI LSWLGIAPKG VVDVHGMLLV
301: TADYLAKGGD TGIFTPMHMI LCRKPE
001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
Arabidopsis Description
SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.