Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 98.61 | 98.89 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 88.09 | 88.58 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 84.21 | 85.39 |
| KRH60980 | Soybean | endoplasmic reticulum | 81.72 | 81.72 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 81.16 | 81.39 |
| KRH51652 | Soybean | endoplasmic reticulum | 81.72 | 81.27 |
| Solyc01g111830.2.1 | Tomato | nucleus | 79.5 | 80.17 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 78.67 | 79.33 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 76.73 | 77.59 |
| Solyc10g055680.1.1 | Tomato | extracellular | 74.52 | 75.35 |
| PGSC0003DMT400093662 | Potato | cytosol | 65.37 | 72.39 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 34.63 | 71.43 |
| Solyc05g008680.1.1 | Tomato | extracellular | 68.98 | 68.59 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 32.96 | 66.85 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 67.31 | 66.76 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 67.31 | 66.76 |
| Os03t0136200-01 | Rice | extracellular | 67.04 | 66.67 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 67.31 | 66.58 |
| Zm00001d048356_P001 | Maize | plasma membrane | 67.59 | 65.95 |
| EER95554 | Sorghum | extracellular, golgi | 67.04 | 65.94 |
| Zm00001d027548_P001 | Maize | plasma membrane | 67.59 | 65.77 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 67.31 | 65.5 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 64.54 | 64.19 |
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 64.54 | 64.19 |
| Zm00001d020855_P001 | Maize | cytosol | 23.82 | 63.7 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 63.99 | 63.64 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 63.99 | 63.64 |
| Zm00001d036295_P001 | Maize | cytosol | 22.99 | 61.48 |
| Bra006211.1-P | Field mustard | cytosol | 36.29 | 38.3 |
| Bra022503.1-P | Field mustard | cytosol | 16.34 | 22.35 |
| Bra008507.1-P | Field mustard | cytosol | 16.07 | 18.83 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | EnsemblPlantsGene:Bra015789 | EnsemblPlants:Bra015789.1 | EnsemblPlants:Bra015789.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | InterPro:IPR030384 | UniProt:M4DH12 |
| InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | PFAM:PF08241 | PFAM:PF08498 | PFscan:PS51685 | PANTHER:PTHR44742 |
| PANTHER:PTHR44742:SF1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | UniParc:UPI000254204F |
| SEG:seg | : | : | : | : | : |
Description
AT1G76090 (E=9e-194) SMT3 | SMT3 (STEROL METHYLTRANSFERASE 3); S-adenosylmethionine-dependent methyltransferase/ sterol 24-C-methyltransferase
Coordinates
chrA07:-:20851239..20852324
Molecular Weight (calculated)
40424.3 Da
IEP (calculated)
7.085
GRAVY (calculated)
-0.315
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSVTLYCTA ALVAAGGIYW FVCVLGPAER KGKRALDLSG GSISAENVKD NYNQYWSFFR KPKEIETAEK VPDFVDTFYN LVTDIYEWGW GQSFHFSPSI
101: PGKSDKDATR IHEEMAVDLI KVKPGQKILD AGCGVGGPMR AIAAHSKAHV TGITINDYQV KRAKLHNKKA GLDHLCDVVC GNFLQMPFDD NSFDGAYSIE
201: ATCHAPKLEE VYAEIYRVMK PGSLYVSYEW VTTDKYRDED EEHREVIQGI ERGDALPGMR RYSDIAAAAR RVGFEVVQEK DLAKPPAKPW WNRLKMGRIA
301: YWRNHVVVVV LSAVGIAPKG TVDVHEMLFK TADYLSRGGE TGIFSPMHMI LCRKPEKASS E
101: PGKSDKDATR IHEEMAVDLI KVKPGQKILD AGCGVGGPMR AIAAHSKAHV TGITINDYQV KRAKLHNKKA GLDHLCDVVC GNFLQMPFDD NSFDGAYSIE
201: ATCHAPKLEE VYAEIYRVMK PGSLYVSYEW VTTDKYRDED EEHREVIQGI ERGDALPGMR RYSDIAAAAR RVGFEVVQEK DLAKPPAKPW WNRLKMGRIA
301: YWRNHVVVVV LSAVGIAPKG TVDVHEMLFK TADYLSRGGE TGIFSPMHMI LCRKPEKASS E
001: MDSVALYCTA GLIAGAVYWF ICVLGPAERK GKRASDLSGG SISAEKVKDN YNQYWSFFRK PKEIESAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPHVP
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
Arabidopsis Description
SMT324-methylenesterol C-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94JS4]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.