Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 98.9 | 98.9 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 98.9 | 98.63 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 97.53 | 95.69 |
| Zm00001d048356_P001 | Maize | plasma membrane | 90.66 | 89.19 |
| Os03t0136200-01 | Rice | extracellular | 88.74 | 88.98 |
| EER95554 | Sorghum | extracellular, golgi | 89.56 | 88.83 |
| Zm00001d027548_P001 | Maize | plasma membrane | 89.84 | 88.14 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 86.54 | 86.78 |
| Zm00001d036295_P001 | Maize | cytosol | 31.32 | 84.44 |
| Zm00001d020855_P001 | Maize | cytosol | 29.4 | 79.26 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 36.81 | 76.57 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 36.54 | 74.72 |
| VIT_03s0038g02920.t01 | Wine grape | extracellular | 70.88 | 72.47 |
| Solyc01g111830.2.1 | Tomato | nucleus | 70.33 | 71.51 |
| PGSC0003DMT400093662 | Potato | cytosol | 63.19 | 70.55 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 69.23 | 70.39 |
| KRH60980 | Soybean | endoplasmic reticulum | 69.78 | 70.36 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 68.68 | 70.03 |
| KRH51652 | Soybean | endoplasmic reticulum | 69.51 | 69.7 |
| CDY71885 | Canola | extracellular | 68.13 | 69.66 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 68.13 | 69.66 |
| CDY51340 | Canola | extracellular | 67.86 | 69.38 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 68.68 | 69.25 |
| Solyc10g055680.1.1 | Tomato | extracellular | 67.31 | 68.63 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 67.86 | 68.61 |
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 66.76 | 67.5 |
| Bra015789.1-P | Field mustard | endoplasmic reticulum, extracellular | 66.76 | 67.31 |
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 66.48 | 67.04 |
| Solyc05g008680.1.1 | Tomato | extracellular | 65.93 | 66.12 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 65.11 | 66.02 |
| TraesCS4D01G336800.1 | Wheat | cytosol | 34.34 | 36.34 |
| TraesCS5D01G469400.1 | Wheat | nucleus, peroxisome, plastid | 32.14 | 31.54 |
| TraesCS6D01G245200.1 | Wheat | plastid | 17.86 | 17.81 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006694 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 | GO:GO:0016740 | InterPro:IPR030384 |
| InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | PFAM:PF08241 | PFAM:PF08498 | PFscan:PS51685 | PANTHER:PTHR44742 |
| PANTHER:PTHR44742:SF2 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G329300 |
| EnsemblPlants:TraesCS4D01G329300.1 | TIGR:cd02440 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:487631864..487632958
Molecular Weight (calculated)
40488.5 Da
IEP (calculated)
6.959
GRAVY (calculated)
-0.139
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPATMAWTA GLVGAGLVYW FVWVMGAAEV KGKRAVDLKM GSITRDKVQD KYTQYWSFFR RPKETASTQA SADKVPAFVD TFYNLVTDIY EWGWGQSFHF
101: SPSLPGRSHR DATRVHEERV ADLLGAEPGH RVLDVGCGVG GPMRAIAAHS GARVVGITIN EYQVNRARAH NRKAGLDAQC EVVCGNFMAM PFDDASFDGA
201: YSIEATCHAP RLQDVYGEVY RVLKPGRLYV SYEWVTTPLY RADDPAHVEA IHGIERGDAL PGLRRQDEIA SIAQEVGFEV VQELDLALPP SLPWWTRLKM
301: GRLAYWRNSL VVRVLTLLRI APKGVVEVHE MLYETAQHLT LGGETGIFSP MHMVVLRKPA AAAE
101: SPSLPGRSHR DATRVHEERV ADLLGAEPGH RVLDVGCGVG GPMRAIAAHS GARVVGITIN EYQVNRARAH NRKAGLDAQC EVVCGNFMAM PFDDASFDGA
201: YSIEATCHAP RLQDVYGEVY RVLKPGRLYV SYEWVTTPLY RADDPAHVEA IHGIERGDAL PGLRRQDEIA SIAQEVGFEV VQELDLALPP SLPWWTRLKM
301: GRLAYWRNSL VVRVLTLLRI APKGVVEVHE MLYETAQHLT LGGETGIFSP MHMVVLRKPA AAAE
001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
Arabidopsis Description
SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.