Factsheet for Bra028301.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

plastid 2
plasma membrane 4
mitochondrion 1
endoplasmic reticulum 3
extracellular 3
vacuole 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	100.0	100.0
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	98.62	98.62
AT5G52240.1	Thale cress	endoplasmic reticulum	78.44	77.73
TraesCS1A01G173400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	55.5	64.71
KRH09074	Soybean	endoplasmic reticulum	59.63	58.56
KRH38500	Soybean	endoplasmic reticulum	58.26	57.73
Bra018028.1-P	Field mustard	endoplasmic reticulum	58.26	57.21
TraesCS1D01G165400.1	Wheat	plastid	57.34	55.56
TraesCS1B01G191000.1	Wheat	golgi	57.34	55.56
EER91417	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	56.42	55.16
HORVU1Hr1G045630.3	Barley	plasma membrane	58.26	54.98
Os10t0502600-01	Rice	plasma membrane, plastid	57.34	53.88
Bra019571.1-P	Field mustard	cytosol	32.11	53.03
Zm00001d013914_P001	Maize	extracellular, plasma membrane, plastid	56.42	53.02
Bra032055.1-P	Field mustard	cytosol	22.94	50.0
GSMUA_Achr5P12190_001	Banana	nucleus	55.05	46.88
GSMUA_Achr11P...	Banana	plasma membrane	55.96	45.86
GSMUA_Achr11P...	Banana	endoplasmic reticulum, nucleus, plastid	53.21	44.96
TraesCS6D01G218900.1	Wheat	cytosol, endoplasmic reticulum, plastid	46.33	35.19
TraesCS6B01G264900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	47.25	34.56
Os02t0640300-01	Rice	plasma membrane	49.54	32.43
Zm00001d017380_P001	Maize	plastid	52.29	31.93
HORVU6Hr1G060500.1	Barley	cytosol, mitochondrion, nucleus	45.87	31.65
TraesCS6A01G235900.1	Wheat	cytosol	45.87	30.77
Zm00001d032531_P001	Maize	plasma membrane	56.88	30.32
EES05839	Sorghum	plastid	49.08	29.64
Bra037079.1-P	Field mustard	golgi	22.02	19.75

Protein Annotations

MapMan:11.3.2.1.4	Gene3D:3.10.120.10	EnsemblPlantsGene:Bra028301	EnsemblPlants:Bra028301.1	EnsemblPlants:Bra028301.1-P	InterPro:Cyt_B5-like_heme/steroid-bd
InterPro:Cyt_B5-like_heme/steroid_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005496	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0005886	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049
GO:GO:0030308	GO:GO:0040007	InterPro:IPR001199	InterPro:IPR036400	UniProt:M4EHN6	PFAM:PF00173
PANTHER:PTHR10281	PANTHER:PTHR10281:SF62	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI0000E64A6E

Description

AT5G52240 (E=1e-102) MSBP1, ATMP1, AtMAPR5 | MSBP1 (membrane steroid binding protein 1); steroid binding

Coordinates

chrA01:-:18789335..18790189

Molecular Weight (calculated)

24149.3 Da

IEP (calculated)

4.409

GRAVY (calculated)

-0.327

Length

218 amino acids

Sequence
(BLAST)

001: MALLLWQTLK EAIHAYTGLS PVVFFTALAL AFSIYQVVSG WFASPFDDVR RHQRARSSAA EEAPPIPQPV QVGEITEEEL KQYDGSDPQK PLLMAIKHQI
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DISGLGPFEL EALQDWEYKF KSKYATVGTV KVTVSEAETA SVSEPAETDD GDAHVIKQEP
201: TVVDKNLETP AESDVKNE

Best Arabidopsis Sequence Match ( AT5G52240.1 )
(BLAST)

001: MALELWQTLK EAIHAYTGLS PVVFFTALAL AFAIYQVISG WFASPFDDVN RHQRARSLAQ EEEPPIPQPV QVGEITEEEL KQYDGSDPQK PLLMAIKHQI
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DVSGLGPFEL DALQDWEYKF MSKYAKVGTV KVAGSEPETA SVSEPTENVE QDAHVTTTPG
201: KTVVDKSDDA PAETVLKKEE

Arabidopsis Description

MSBP1Membrane steroid-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFM6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.