Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 5
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61583 | Canola | endoplasmic reticulum, extracellular, golgi | 78.64 | 79.36 |
| Bra028301.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 77.73 | 78.44 |
| CDY00522 | Canola | endoplasmic reticulum, extracellular, golgi | 77.73 | 78.44 |
| TraesCS1A01G173400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 55.91 | 65.78 |
| KRH09074 | Soybean | endoplasmic reticulum | 58.64 | 58.11 |
| AT3G48890.1 | Thale cress | endoplasmic reticulum | 60.91 | 57.51 |
| EER91417 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 58.18 | 57.4 |
| KRH38500 | Soybean | endoplasmic reticulum | 57.27 | 57.27 |
| TraesCS1D01G165400.1 | Wheat | plastid | 57.27 | 56.0 |
| Zm00001d013914_P001 | Maize | extracellular, plasma membrane, plastid | 58.64 | 55.6 |
| TraesCS1B01G191000.1 | Wheat | golgi | 56.82 | 55.56 |
| HORVU1Hr1G045630.3 | Barley | plasma membrane | 58.18 | 55.41 |
| Os10t0502600-01 | Rice | plasma membrane, plastid | 57.73 | 54.74 |
| AT2G24940.1 | Thale cress | nucleus | 22.27 | 49.0 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, nucleus, plastid | 56.36 | 48.06 |
| GSMUA_Achr5P12190_001 | Banana | nucleus | 55.91 | 48.05 |
| GSMUA_Achr11P... | Banana | plasma membrane | 55.91 | 46.24 |
| TraesCS6D01G218900.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 47.73 | 36.59 |
| TraesCS6B01G264900.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 48.18 | 35.57 |
| Os02t0640300-01 | Rice | plasma membrane | 50.91 | 33.63 |
| HORVU6Hr1G060500.1 | Barley | cytosol, mitochondrion, nucleus | 47.73 | 33.23 |
| TraesCS6A01G235900.1 | Wheat | cytosol | 47.27 | 32.0 |
| Zm00001d032531_P001 | Maize | plasma membrane | 59.09 | 31.78 |
| Zm00001d017380_P001 | Maize | plastid | 49.55 | 30.53 |
| EES05839 | Sorghum | plastid | 49.55 | 30.19 |
| AT4G14965.1 | Thale cress | golgi | 20.45 | 18.37 |
Protein Annotations
| MapMan:11.3.2.1.4 | Gene3D:3.10.120.10 | EntrezGene:835300 | ProteinID:AED96190.1 | EMBL:AF153284 | ArrayExpress:AT5G52240 |
| EnsemblPlantsGene:AT5G52240 | RefSeq:AT5G52240 | TAIR:AT5G52240 | RefSeq:AT5G52240-TAIR-G | EnsemblPlants:AT5G52240.1 | TAIR:AT5G52240.1 |
| EMBL:AY086811 | ProteinID:BAA97467.1 | EMBL:BT000922 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005496 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0008150 |
| GO:GO:0008289 | GO:GO:0009987 | GO:GO:0010008 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0020037 | GO:GO:0030308 | GO:GO:0040007 | InterPro:IPR001199 | InterPro:IPR036400 |
| Symbol:MSBP1 | RefSeq:NP_200037.1 | PFAM:PF00173 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10281 |
| PANTHER:PTHR10281:SF62 | UniProt:Q9XFM6 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI00000AC213 |
| SEG:seg | : | : | : | : | : |
Description
MSBP1Membrane steroid-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFM6]
Coordinates
chr5:+:21212940..21214842
Molecular Weight (calculated)
24406.7 Da
IEP (calculated)
4.370
GRAVY (calculated)
-0.378
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MALELWQTLK EAIHAYTGLS PVVFFTALAL AFAIYQVISG WFASPFDDVN RHQRARSLAQ EEEPPIPQPV QVGEITEEEL KQYDGSDPQK PLLMAIKHQI
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DVSGLGPFEL DALQDWEYKF MSKYAKVGTV KVAGSEPETA SVSEPTENVE QDAHVTTTPG
201: KTVVDKSDDA PAETVLKKEE
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DVSGLGPFEL DALQDWEYKF MSKYAKVGTV KVAGSEPETA SVSEPTENVE QDAHVTTTPG
201: KTVVDKSDDA PAETVLKKEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.