Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 4
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 3
- vacuole 2
- golgi 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028301.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 100.0 | 100.0 |
| CDY61583 | Canola | endoplasmic reticulum, extracellular, golgi | 98.62 | 98.62 |
| AT5G52240.1 | Thale cress | endoplasmic reticulum | 78.44 | 77.73 |
| TraesCS1A01G173400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 55.5 | 64.71 |
| KRH09074 | Soybean | endoplasmic reticulum | 59.63 | 58.56 |
| KRH38500 | Soybean | endoplasmic reticulum | 58.26 | 57.73 |
| CDY71101 | Canola | endoplasmic reticulum | 58.72 | 57.66 |
| CDY05880 | Canola | endoplasmic reticulum | 58.26 | 57.21 |
| TraesCS1D01G165400.1 | Wheat | plastid | 57.34 | 55.56 |
| TraesCS1B01G191000.1 | Wheat | golgi | 57.34 | 55.56 |
| EER91417 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 56.42 | 55.16 |
| HORVU1Hr1G045630.3 | Barley | plasma membrane | 58.26 | 54.98 |
| Os10t0502600-01 | Rice | plasma membrane, plastid | 57.34 | 53.88 |
| Zm00001d013914_P001 | Maize | extracellular, plasma membrane, plastid | 56.42 | 53.02 |
| CDY37905 | Canola | cytosol | 31.65 | 52.27 |
| CDX87002 | Canola | endoplasmic reticulum | 52.29 | 52.05 |
| CDY36148 | Canola | nucleus | 22.94 | 50.0 |
| GSMUA_Achr5P12190_001 | Banana | nucleus | 55.05 | 46.88 |
| GSMUA_Achr11P... | Banana | plasma membrane | 55.96 | 45.86 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, nucleus, plastid | 53.21 | 44.96 |
| TraesCS6D01G218900.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 46.33 | 35.19 |
| TraesCS6B01G264900.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 47.25 | 34.56 |
| Os02t0640300-01 | Rice | plasma membrane | 49.54 | 32.43 |
| Zm00001d017380_P001 | Maize | plastid | 52.29 | 31.93 |
| HORVU6Hr1G060500.1 | Barley | cytosol, mitochondrion, nucleus | 45.87 | 31.65 |
| TraesCS6A01G235900.1 | Wheat | cytosol | 45.87 | 30.77 |
| Zm00001d032531_P001 | Maize | plasma membrane | 56.88 | 30.32 |
| EES05839 | Sorghum | plastid | 49.08 | 29.64 |
| CDY08286 | Canola | golgi | 22.02 | 19.75 |
| CDY06492 | Canola | golgi | 22.02 | 19.67 |
Protein Annotations
| EnsemblPlants:CDY00522 | EnsemblPlantsGene:GSBRNA2T00110252001 | Gene3D:3.10.120.10 | GO:A0A078EHF2 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR10281 |
| PANTHER:PTHR10281:SF62 | PFAM:PF00173 | ProteinID:CDY00522 | ProteinID:CDY00522.1 | SMART:SM01117 | SUPFAM:SSF55856 |
| TMHMM:TMhelix | UniParc:UPI0000E64A6E | MapMan:11.3.2.1.4 | : | : | : |
Description
BnaA10g07510D
Coordinates
chrLK031919:+:1033194..1034262
Molecular Weight (calculated)
24149.3 Da
IEP (calculated)
4.409
GRAVY (calculated)
-0.327
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLLWQTLK EAIHAYTGLS PVVFFTALAL AFSIYQVVSG WFASPFDDVR RHQRARSSAA EEAPPIPQPV QVGEITEEEL KQYDGSDPQK PLLMAIKHQI
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DISGLGPFEL EALQDWEYKF KSKYATVGTV KVTVSEAETA SVSEPAETDD GDAHVIKQEP
201: TVVDKNLETP AESDVKNE
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DISGLGPFEL EALQDWEYKF KSKYATVGTV KVTVSEAETA SVSEPAETDD GDAHVIKQEP
201: TVVDKNLETP AESDVKNE
001: MALELWQTLK EAIHAYTGLS PVVFFTALAL AFAIYQVISG WFASPFDDVN RHQRARSLAQ EEEPPIPQPV QVGEITEEEL KQYDGSDPQK PLLMAIKHQI
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DVSGLGPFEL DALQDWEYKF MSKYAKVGTV KVAGSEPETA SVSEPTENVE QDAHVTTTPG
201: KTVVDKSDDA PAETVLKKEE
101: YDVTQSRMFY GPGGPYALFA GKDASRALAK MSFEEKDLTW DVSGLGPFEL DALQDWEYKF MSKYAKVGTV KVAGSEPETA SVSEPTENVE QDAHVTTTPG
201: KTVVDKSDDA PAETVLKKEE
Arabidopsis Description
MSBP1Membrane steroid-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFM6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.