CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037079.1-P	Field mustard	golgi	94.67	95.06
CDY08286	Canola	golgi	94.67	95.06
AT4G14965.1	Thale cress	golgi	87.7	87.35
KRH17625	Soybean	endoplasmic reticulum, golgi, vacuole	69.67	70.54
PGSC0003DMT400002456	Potato	endoplasmic reticulum	69.26	70.42
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	66.8	67.08
KRG90070	Soybean	endoplasmic reticulum	65.16	65.98
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	63.93	62.15
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	59.02	60.76
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	60.66	60.41
EER95310	Sorghum	endoplasmic reticulum, golgi	58.61	60.34
Os03t0205500-01	Rice	endoplasmic reticulum	58.61	60.34
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	58.2	59.92
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	57.79	59.49
Zm00001d048139_P001	Maize	cytosol	40.57	58.58
Zm00001d048140_P001	Maize	extracellular, plasma membrane	17.21	50.6
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	59.02	42.99
CDY36148	Canola	nucleus	17.21	42.0
CDY37905	Canola	cytosol	13.93	25.76
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	20.08	22.48
CDY71101	Canola	endoplasmic reticulum	20.08	22.07
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	19.67	22.02
CDY05880	Canola	endoplasmic reticulum	19.67	21.62
CDX87002	Canola	endoplasmic reticulum	18.85	21.0

Protein Annotations

EnsemblPlants:CDY06492	EnsemblPlantsGene:GSBRNA2T00122589001	Gene3D:3.10.120.10	GO:A0A078F023	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
InterPro:IPR001199	InterPro:IPR036400	PANTHER:PTHR10281	PANTHER:PTHR10281:SF4	PFAM:PF00173	ProteinID:CDY06492
ProteinID:CDY06492.1	SEG:seg	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI0004EAC339
MapMan:11.3.2.1.4	:	:	:	:	:

Description

BnaC06g11520D

Coordinates

chrLK031970:+:874791..877031

Molecular Weight (calculated)

26986.1 Da

IEP (calculated)

8.348

GRAVY (calculated)

-0.371

Length

244 amino acids

Sequence
(BLAST)

001: MMSLRRILLS PFVGVSLIVV LLALYFRSSF KSPPQHSQRL FSAEELALYN GTDETLPILL GILGSVYDVT KGKSHYGSGG GYNHFAGRDA SRAFVSGNFT
101: GDGLTDSLHG LSSSEVKSIV DWRGFYARTY TPVGKLVGRY YDRQGNPTKH LKGAEAKASR GAQLMEKQKI EEDKQKNCNS RWSQDEGGEV WCDVGVPRLV
201: QRPLEIAITG SMSKRCACFE EDQLDQSGLE IYKDCEPLAK TCKV

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.