Factsheet for HORVU4Hr1G069740.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi, plastid

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	58.21	82.28
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	56.42	79.75
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	56.12	79.32
Zm00001d048139_P001	Maize	cytosol	37.61	74.56
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	52.54	71.84
Os03t0205500-01	Rice	endoplasmic reticulum	50.45	71.31
EER95310	Sorghum	endoplasmic reticulum, golgi	49.85	70.46
KRH17625	Soybean	endoplasmic reticulum, golgi, vacuole	45.97	63.9
PGSC0003DMT400002456	Potato	endoplasmic reticulum	45.07	62.92
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	45.37	62.55
KRG90070	Soybean	endoplasmic reticulum	44.18	61.41
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	44.78	59.76
CDY06492	Canola	golgi	42.99	59.02
AT4G14965.1	Thale cress	golgi	42.39	57.96
Bra037079.1-P	Field mustard	golgi	41.19	56.79
CDY08286	Canola	golgi	41.19	56.79
Zm00001d048140_P001	Maize	extracellular, plasma membrane	13.43	54.22
HORVU6Hr1G084640.1	Barley	cytosol, nucleus, plastid	10.75	35.29
HORVU4Hr1G052100.3	Barley	endoplasmic reticulum	14.33	23.53
HORVU1Hr1G045630.3	Barley	plasma membrane	16.12	23.38
HORVU1Hr1G045610.5	Barley	plastid	14.93	17.48
HORVU6Hr1G060500.1	Barley	cytosol, mitochondrion, nucleus	15.22	16.14

Protein Annotations

EnsemblPlants:HORVU4Hr1G069740.2	EnsemblPlantsGene:HORVU4Hr1G069740	Gene3D:3.10.120.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:IPR001199	InterPro:IPR036400	PANTHER:PTHR10281	PANTHER:PTHR10281:SF4
PFAM:PF00173	SEG:seg	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI000B4720B4
UniProt:A0A287PIQ5	MapMan:11.3.2.1.4	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:572562565..572568916

Molecular Weight (calculated)

37071.6 Da

IEP (calculated)

9.613

GRAVY (calculated)

-0.237

Length

335 amino acids

Sequence
(BLAST)

001: FVSPKIWTPV FVSSFRHDRP AEWSVRNLPV AQQTRGVEWT PAPVAAAPPP SPPPLPTLGR SPIRTQSRLH PPSRRVQGQL HFAAVLCWLV DLSVAATSMA
101: LGARLLLGLA LLTALIAVLL QLYRLRKPRL WTLDELSIYN GTDEGLPILL GILGSVFDVT KGRSHYGPGG GYHHFSGRDA SRAFVSGNFT GDGLTDSLHG
201: LSSMEVNSIV DWRKFYVERY IFAGKIVGRY YDSEGNPTKY LKGVEMKAKR GAQLLEKQKR EEDKIPSCNS KWSQAEGGEV WCETGYPRLV RRPGDIALTG
301: QVSQRCACFR EEELGRPGLV VYQGCDHQST SCIVK

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.