CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0205500-01	Rice	endoplasmic reticulum	87.76	87.76
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	86.92	86.92
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	85.65	85.65
Zm00001d048139_P001	Maize	cytosol	56.96	79.88
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	78.48	78.48
Zm00001d048140_P001	Maize	extracellular, plasma membrane	25.74	73.49
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	70.89	68.57
KRG90070	Soybean	endoplasmic reticulum	66.24	65.15
KRH17625	Soybean	endoplasmic reticulum, golgi, vacuole	63.71	62.66
CDY08286	Canola	golgi	63.71	62.14
Bra037079.1-P	Field mustard	golgi	63.71	62.14
PGSC0003DMT400002456	Potato	endoplasmic reticulum	61.18	60.42
CDY06492	Canola	golgi	60.34	58.61
AT4G14965.1	Thale cress	golgi	60.34	58.37
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	59.49	58.02
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	59.92	56.57
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	70.46	49.85
EES05944	Sorghum	cytosol, nucleus, plastid	15.19	34.95
EER94942	Sorghum	endoplasmic reticulum	22.36	25.85
EER91417	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	21.52	22.87
EER93976	Sorghum	plastid	18.99	17.37
EES05839	Sorghum	plastid	24.47	16.07

Protein Annotations

MapMan:11.3.2.1.4	Gene3D:3.10.120.10	EntrezGene:8054226	UniProt:C5WTR9	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
EnsemblPlants:EER95310	ProteinID:EER95310	ProteinID:EER95310.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0012505	GO:GO:0016020	GO:GO:0020037	InterPro:IPR001199	InterPro:IPR036400
PFAM:PF00173	PANTHER:PTHR10281	PANTHER:PTHR10281:SF4	SMART:SM01117	EnsemblPlantsGene:SORBI_3001G464100	SUPFAM:SSF55856
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0001A8346B	RefSeq:XP_002468312.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:73812286..73817033

Molecular Weight (calculated)

26290.5 Da

IEP (calculated)

9.281

GRAVY (calculated)

-0.303

Length

237 amino acids

Sequence
(BLAST)

001: MARGARFLLV LALLAALLAV VLQLYRLRKP RLWTVEELSP YNGTNEGLPI LLAILGSVFD VTKGRSHYGP GGGYHHFTGR DASRAFVSGN FTGNGLTDSL
101: QGLSSSEVNS IVDWRKFYFE RYIFAGKLIG RYYDSQGNPT KYLKGVEMKA KRGAQLLEKQ KSDEAKIPGC NSKWSQQEGG EVWCDTGYPR LVRRPGDIAL
201: TGQVSQRCAC FQENELDKAG LVVYEGCDYL SKSCKVN

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.