CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
plasma membrane 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91417	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	35.73	57.85
EES05944	Sorghum	cytosol, nucleus, plastid	14.96	52.43
KRH09074	Soybean	endoplasmic reticulum	31.3	50.9
KRH38500	Soybean	endoplasmic reticulum	30.75	50.45
Zm00001d017380_P001	Maize	plastid	49.58	50.14
GSMUA_Achr11P...	Banana	endoplasmic reticulum, nucleus, plastid	35.73	50.0
AT5G52240.1	Thale cress	endoplasmic reticulum	30.19	49.55
Bra028301.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	29.64	49.08
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	29.64	49.08
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	29.64	49.08
TraesCS6D01G218900.1	Wheat	cytosol, endoplasmic reticulum, plastid	38.23	48.08
GSMUA_Achr11P...	Banana	plasma membrane	35.18	47.74
TraesCS6B01G264900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	37.67	45.64
TraesCS6A01G235900.1	Wheat	cytosol	40.44	44.92
Os02t0640300-01	Rice	plasma membrane	40.44	43.84
EER94942	Sorghum	endoplasmic reticulum	23.82	41.95
HORVU6Hr1G060500.1	Barley	cytosol, mitochondrion, nucleus	36.29	41.46
EER93976	Sorghum	plastid	26.04	36.29
EER95310	Sorghum	endoplasmic reticulum, golgi	16.07	24.47

Protein Annotations

MapMan:11.3.2.1.4	Gene3D:3.10.120.10	EntrezGene:8075181	UniProt:C5XSR1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
EnsemblPlants:EES05839	ProteinID:EES05839	ProteinID:EES05839.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	InterPro:IPR001199
InterPro:IPR036400	PFAM:PF00173	PANTHER:PTHR10281	PANTHER:PTHR10281:SF45	SMART:SM01117	EnsemblPlantsGene:SORBI_3004G304800
SUPFAM:SSF55856	unigene:Sbi.9088	TMHMM:TMhelix	UniParc:UPI0001A8596A	RefSeq:XP_002452863.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:64348939..64352132

Molecular Weight (calculated)

38832.4 Da

IEP (calculated)

4.070

GRAVY (calculated)

-0.606

Length

361 amino acids

Sequence
(BLAST)

001: MAMAAEWWDA ATAAVAAYTG MTPAAFFTAV AVAAALYVAI SGLLARPAQT SSTRQEVAAA EEEERAFEPL PPPVQLGEVT EEELRAYDGS DPNKPLLMAI
101: KGQIYDVTQS RIFYGPGGPY ALFAGRDASR ALAKMSFEAS DLTGDISGLG PFEVEALQEW EHKFKSKYVT VGIIKKTVPL SEGDDTARNA VTTERDIDAS
201: TTESNNVPEP NETGITDQGS VAEKIAESPD VDVNTSSHED TEEKAKELPD SDVTNTIGQV DAVEKPEGTP NAVVKNRRSI EDAVEPKETP QVVDGKDTCE
301: PEGATVKPEE AADAIELKNT TSHEDAKQPK EIRNEDEKDV TSYQHGEENP KETSDVEVNN A

Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)

001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE

Arabidopsis Description

MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.