Factsheet for Zm00001d017380_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09074	Soybean	endoplasmic reticulum	33.89	54.5
Zm00001d013914_P001	Maize	extracellular, plasma membrane, plastid	34.73	53.45
KRH38500	Soybean	endoplasmic reticulum	32.49	52.73
Bra028301.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	31.93	52.29
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	31.93	52.29
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	31.65	51.83
Zm00001d018363_P001	Maize	mitochondrion	14.85	50.96
EES05839	Sorghum	plastid	50.14	49.58
Os02t0640300-01	Rice	plasma membrane	46.22	49.55
AT5G52240.1	Thale cress	endoplasmic reticulum	30.53	49.55
GSMUA_Achr11P...	Banana	endoplasmic reticulum, nucleus, plastid	34.45	47.67
TraesCS6D01G218900.1	Wheat	cytosol, endoplasmic reticulum, plastid	37.82	47.04
GSMUA_Achr11P...	Banana	plasma membrane	34.73	46.62
TraesCS6B01G264900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	38.1	45.64
Zm00001d028955_P001	Maize	endoplasmic reticulum	23.81	42.93
TraesCS6A01G235900.1	Wheat	cytosol	38.94	42.77
HORVU6Hr1G060500.1	Barley	cytosol, mitochondrion, nucleus	36.69	41.46
Zm00001d048140_P001	Maize	extracellular, plasma membrane	8.96	38.55
Zm00001d032531_P001	Maize	plasma membrane	38.66	33.74
Zm00001d048139_P001	Maize	cytosol	5.88	12.43

Protein Annotations

EnsemblPlants:Zm00001d017380_P001	EnsemblPlants:Zm00001d017380_T001	EnsemblPlantsGene:Zm00001d017380	EntrezGene:103627472	Gene3D:3.10.120.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:IPR001199	InterPro:IPR036400
PANTHER:PTHR10281	PANTHER:PTHR10281:SF45	PFAM:PF00173	ProteinID:AQK73039.1	SEG:seg	SMART:SM01117
SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI00022158CF	UniProt:A0A1D6HEG7	MapMan:11.3.2.1.4	:

Description

Membrane steroid-binding protein 1

Coordinates

chr5:-:193887164..193890043

Molecular Weight (calculated)

38684.5 Da

IEP (calculated)

4.275

GRAVY (calculated)

-0.641

Length

357 amino acids

Sequence
(BLAST)

001: MAMAMAEWWA AATEAVAVYT GLTPTAFFTA VAVAAALYVA VSGLFARPAQ TSSRRQEEAA EERTFEPLPP PVQLGEVTEE ELRAYDGSDP KKPLLMAIKG
101: QIYDVTQSRI FYGPGGPYAS FAGRDASRAL AKMSFEASDL TGDISGLGPL EVEALQEWEY KFKSKYVTVG IIKKTVPFSE GDAARSDVTT ERDIVAGIVE
201: SNSVPEPEET GMTNQGSVVE KITESPDIDV NTSSHEDAKK AKELPDPDVT NTSSQADAVD KPEEIPNAVV KNRRSIEGAI EAKETPQVED GKDTYQPEDA
301: TEKPNEATDV VDLKNTASHE DAKQPKKTRN EDEKDVSSHQ HGDENPKETS NVEVKNA

Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)

001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE

Arabidopsis Description

MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.