Factsheet for Zm00001d018363_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05944	Sorghum	cytosol, nucleus, plastid	94.23	95.15
Os02t0793700-02	Rice	extracellular	91.35	93.14
HORVU6Hr1G084640.1	Barley	cytosol, nucleus, plastid	85.58	87.25
TraesCS6D01G336900.1	Wheat	cytosol, nucleus, plastid	85.58	87.25
TraesCS6B01G387500.1	Wheat	unclear	85.58	87.25
TraesCS6A01G354500.1	Wheat	cytosol, nucleus, plastid	85.58	87.25
GSMUA_Achr6P03970_001	Banana	cytosol	75.0	78.0
KRH61642	Soybean	cytosol	66.35	69.0
VIT_04s0008g06870.t01	Wine grape	cytosol, nucleus, plastid	62.5	65.66
KRH52307	Soybean	nucleus	69.23	64.86
Bra032055.1-P	Field mustard	cytosol	61.54	64.0
CDY36148	Canola	nucleus	61.54	64.0
AT2G24940.1	Thale cress	nucleus	60.58	63.0
KRH31695	Soybean	cytosol	47.12	62.03
PGSC0003DMT400029206	Potato	cytosol	59.62	62.0
PGSC0003DMT400038438	Potato	cytosol	58.65	61.0
Solyc08g029160.1.1	Tomato	extracellular	57.69	60.0
KRH75821	Soybean	cytosol, nucleus, plastid	44.23	54.76
KRH25811	Soybean	mitochondrion	44.23	46.94
Zm00001d048140_P001	Maize	extracellular, plasma membrane	25.0	31.33
Zm00001d028955_P001	Maize	endoplasmic reticulum	54.81	28.79
Zm00001d013914_P001	Maize	extracellular, plasma membrane, plastid	49.04	21.98
Zm00001d017380_P001	Maize	plastid	50.96	14.85
Zm00001d032531_P001	Maize	plasma membrane	50.0	12.71
Zm00001d048139_P001	Maize	cytosol	12.5	7.69

Protein Annotations

EntrezGene:100280580	MapMan:11.3.2.1.4	Gene3D:3.10.120.10	ProteinID:AQK75722.1	UniProt:B4FPD1	EMBL:BT038969
InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	EMBL:EU952588	EMBL:EU952709	EMBL:EU952750	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR001199	InterPro:IPR036400
PFAM:PF00173	PANTHER:PTHR10281	PANTHER:PTHR10281:SF26	SMART:SM01117	SUPFAM:SSF55856	UniParc:UPI00017B7E4B
EnsemblPlantsGene:Zm00001d018363	EnsemblPlants:Zm00001d018363_P001	EnsemblPlants:Zm00001d018363_T001	:	:	:

Description

Probable steroid-binding protein 3

Coordinates

chr5:+:219212152..219212466

Molecular Weight (calculated)

11009.0 Da

IEP (calculated)

5.109

GRAVY (calculated)

-0.203

Length

104 amino acids

Sequence
(BLAST)

001: MATELTAAQL RAYDGTDPSK PIYVSVRGKV YDVTSGRGFY GPGGAYAVFA GREASRALGK MSKDEADVSG DLSGLTDKEL GVLADWEIKF QAKYPVVARL
101: AADA

Best Arabidopsis Sequence Match ( AT2G24940.1 )
(BLAST)

1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS

Arabidopsis Description

MP3MAPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.