Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G387500.1 | Wheat | unclear | 100.0 | 100.0 |
| HORVU6Hr1G084640.1 | Barley | cytosol, nucleus, plastid | 100.0 | 100.0 |
| TraesCS6A01G354500.1 | Wheat | cytosol, nucleus, plastid | 100.0 | 100.0 |
| EES05944 | Sorghum | cytosol, nucleus, plastid | 87.25 | 86.41 |
| Zm00001d018363_P001 | Maize | mitochondrion | 87.25 | 85.58 |
| Os02t0793700-02 | Rice | extracellular | 84.31 | 84.31 |
| GSMUA_Achr6P03970_001 | Banana | cytosol | 76.47 | 78.0 |
| KRH61642 | Soybean | cytosol | 65.69 | 67.0 |
| PGSC0003DMT400029206 | Potato | cytosol | 64.71 | 66.0 |
| PGSC0003DMT400038438 | Potato | cytosol | 63.73 | 65.0 |
| VIT_04s0008g06870.t01 | Wine grape | cytosol, nucleus, plastid | 62.75 | 64.65 |
| Solyc08g029160.1.1 | Tomato | extracellular | 62.75 | 64.0 |
| KRH31695 | Soybean | cytosol | 49.02 | 63.29 |
| CDY36148 | Canola | nucleus | 61.76 | 63.0 |
| Bra032055.1-P | Field mustard | cytosol | 61.76 | 63.0 |
| KRH52307 | Soybean | nucleus | 67.65 | 62.16 |
| AT2G24940.1 | Thale cress | nucleus | 60.78 | 62.0 |
| KRH75821 | Soybean | cytosol, nucleus, plastid | 45.1 | 54.76 |
| KRH25811 | Soybean | mitochondrion | 47.06 | 48.98 |
| TraesCS4D01G178900.2 | Wheat | endoplasmic reticulum | 59.8 | 31.12 |
| TraesCS1D01G165400.1 | Wheat | plastid | 50.98 | 23.11 |
| TraesCS1D01G165500.1 | Wheat | golgi, plastid | 53.92 | 22.54 |
| TraesCS6D01G218900.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 49.02 | 17.42 |
| TraesCS4D01G256800.1 | Wheat | endoplasmic reticulum | 35.29 | 15.19 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G336900.1 | EnsemblPlantsGene:TraesCS6D01G336900 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 |
| InterPro:IPR036400 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF26 | PFAM:PF00173 | SMART:SM01117 | SUPFAM:SSF55856 |
| MapMan:11.3.2.1.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:437772827..437773369
Molecular Weight (calculated)
10706.7 Da
IEP (calculated)
6.812
GRAVY (calculated)
-0.074
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MATELTAAQL RAYDGTDASK PIYVAIRGKV FDVSAGRGFY GPGGDYALFA GREAARALAK MSKDAADVSG DLSGLSDKEL GVLADWESKF QAKYPVVARL
101: AA
101: AA
1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS
Arabidopsis Description
MP3MAPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.