Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
22364583
extracellular: 22892874 extracellular: 29876421 |
msms PMID:
22892874
doi
Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038438 | Potato | cytosol | 98.0 | 98.0 |
| PGSC0003DMT400029206 | Potato | cytosol | 97.0 | 97.0 |
| VIT_04s0008g06870.t01 | Wine grape | cytosol, nucleus, plastid | 83.0 | 83.84 |
| Bra032055.1-P | Field mustard | cytosol | 76.0 | 76.0 |
| CDY36148 | Canola | nucleus | 76.0 | 76.0 |
| AT2G24940.1 | Thale cress | nucleus | 75.0 | 75.0 |
| KRH61642 | Soybean | cytosol | 72.0 | 72.0 |
| KRH31695 | Soybean | cytosol | 54.0 | 68.35 |
| GSMUA_Achr6P03970_001 | Banana | cytosol | 68.0 | 68.0 |
| KRH52307 | Soybean | nucleus | 73.0 | 65.77 |
| HORVU6Hr1G084640.1 | Barley | cytosol, nucleus, plastid | 64.0 | 62.75 |
| TraesCS6D01G336900.1 | Wheat | cytosol, nucleus, plastid | 64.0 | 62.75 |
| TraesCS6B01G387500.1 | Wheat | unclear | 64.0 | 62.75 |
| TraesCS6A01G354500.1 | Wheat | cytosol, nucleus, plastid | 64.0 | 62.75 |
| Os02t0793700-02 | Rice | extracellular | 62.0 | 60.78 |
| KRH75821 | Soybean | cytosol, nucleus, plastid | 51.0 | 60.71 |
| EES05944 | Sorghum | cytosol, nucleus, plastid | 62.0 | 60.19 |
| Zm00001d018363_P001 | Maize | mitochondrion | 60.0 | 57.69 |
| KRH25811 | Soybean | mitochondrion | 55.0 | 56.12 |
| Solyc04g049790.2.1 | Tomato | endoplasmic reticulum | 51.0 | 31.48 |
| Solyc03g025950.2.1 | Tomato | plastid | 55.0 | 24.23 |
| Solyc06g035870.2.1 | Tomato | plastid | 57.0 | 23.75 |
| Solyc07g044830.2.1 | Tomato | endoplasmic reticulum | 40.0 | 16.46 |
Protein Annotations
| MapMan:11.3.2.1.4 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0012505 |
| GO:GO:0016020 | GO:GO:0020037 | InterPro:IPR001199 | InterPro:IPR036400 | UniProt:K4CJX8 | PFAM:PF00173 |
| PANTHER:PTHR10281 | PANTHER:PTHR10281:SF26 | SMART:SM01117 | SUPFAM:SSF55856 | EnsemblPlantsGene:Solyc08g029160.1 | EnsemblPlants:Solyc08g029160.1.1 |
| UniParc:UPI000276BE93 | : | : | : | : | : |
Description
Probable steroid-binding protein 3 [Source:Projected from Arabidopsis thaliana (AT2G24940) UniProtKB/Swiss-Prot;Acc:Q9SK39]
Coordinates
chr8:-:38024622..38024924
Molecular Weight (calculated)
10822.7 Da
IEP (calculated)
4.366
GRAVY (calculated)
-0.335
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MELTADELKA YDGSDPSKPI YVAIKGRIFD VSAGNSFYGP GGPYCMFAGK DASRALAKMS KNEEDVSPSL DGLSEKEMAV LNDWETKFEA KYSIVGNVIS
1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS
Arabidopsis Description
MP3MAPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.