Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038438 | Potato | cytosol | 84.85 | 84.0 |
| Solyc08g029160.1.1 | Tomato | extracellular | 83.84 | 83.0 |
| PGSC0003DMT400029206 | Potato | cytosol | 83.84 | 83.0 |
| Bra032055.1-P | Field mustard | cytosol | 81.82 | 81.0 |
| CDY36148 | Canola | nucleus | 81.82 | 81.0 |
| KRH61642 | Soybean | cytosol | 81.82 | 81.0 |
| AT2G24940.1 | Thale cress | nucleus | 79.8 | 79.0 |
| KRH31695 | Soybean | cytosol | 60.61 | 75.95 |
| KRH52307 | Soybean | nucleus | 81.82 | 72.97 |
| GSMUA_Achr6P03970_001 | Banana | cytosol | 72.73 | 72.0 |
| KRH75821 | Soybean | cytosol, nucleus, plastid | 56.57 | 66.67 |
| Os02t0793700-02 | Rice | extracellular | 66.67 | 64.71 |
| EES05944 | Sorghum | cytosol, nucleus, plastid | 65.66 | 63.11 |
| HORVU6Hr1G084640.1 | Barley | cytosol, nucleus, plastid | 64.65 | 62.75 |
| TraesCS6A01G354500.1 | Wheat | cytosol, nucleus, plastid | 64.65 | 62.75 |
| TraesCS6B01G387500.1 | Wheat | unclear | 64.65 | 62.75 |
| TraesCS6D01G336900.1 | Wheat | cytosol, nucleus, plastid | 64.65 | 62.75 |
| Zm00001d018363_P001 | Maize | mitochondrion | 65.66 | 62.5 |
| KRH25811 | Soybean | mitochondrion | 57.58 | 58.16 |
| VIT_16s0100g01280.t01 | Wine grape | endoplasmic reticulum | 53.54 | 24.65 |
| VIT_02s0012g02780.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, vacuole | 37.37 | 14.74 |
Protein Annotations
| EntrezGene:100252604 | wikigene:100252604 | MapMan:11.3.2.1.4 | Gene3D:3.10.120.10 | UniProt:A5BA15 | EMBL:AM451833 |
| ProteinID:CAN83013 | ProteinID:CAN83013.1 | ProteinID:CBI21159 | ProteinID:CBI21159.3 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf |
| EMBL:FN595231 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0020037 | InterPro:IPR001199 |
| InterPro:IPR036400 | EntrezGene:LOC100252604 | wikigene:LOC100252604 | PFAM:PF00173 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF26 |
| SMART:SM01117 | SUPFAM:SSF55856 | TIGR:TC61596 | TIGR:TC64004 | UniParc:UPI00015242AA | ArrayExpress:VIT_04s0008g06870 |
| EnsemblPlantsGene:VIT_04s0008g06870 | EnsemblPlants:VIT_04s0008g06870.t01 | unigene:Vvi.8012 | RefSeq:XP_002285572 | RefSeq:XP_002285572.1 | RefSeq:XP_010648770.1 |
Description
No Description!
Coordinates
chr4:-:6905828..6906361
Molecular Weight (calculated)
10845.9 Da
IEP (calculated)
5.137
GRAVY (calculated)
-0.433
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MEVTAEQLKQ FDGSDPSKPI YVAVKGRIFD VTTGKSFYGP GGSYCMFAGK DASRALAKMS KNEEDVSPSL DGLSEKEMGV LNDWENKFQA KYPVVGRVI
1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS
Arabidopsis Description
MP3MAPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.