Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| cytosol:
22313117
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029206 | Potato | cytosol | 99.0 | 99.0 |
| Solyc08g029160.1.1 | Tomato | extracellular | 98.0 | 98.0 |
| VIT_04s0008g06870.t01 | Wine grape | cytosol, nucleus, plastid | 84.0 | 84.85 |
| Bra032055.1-P | Field mustard | cytosol | 76.0 | 76.0 |
| CDY36148 | Canola | nucleus | 76.0 | 76.0 |
| AT2G24940.1 | Thale cress | nucleus | 75.0 | 75.0 |
| KRH61642 | Soybean | cytosol | 73.0 | 73.0 |
| KRH31695 | Soybean | cytosol | 55.0 | 69.62 |
| GSMUA_Achr6P03970_001 | Banana | cytosol | 69.0 | 69.0 |
| KRH52307 | Soybean | nucleus | 74.0 | 66.67 |
| HORVU6Hr1G084640.1 | Barley | cytosol, nucleus, plastid | 65.0 | 63.73 |
| TraesCS6D01G336900.1 | Wheat | cytosol, nucleus, plastid | 65.0 | 63.73 |
| TraesCS6B01G387500.1 | Wheat | unclear | 65.0 | 63.73 |
| TraesCS6A01G354500.1 | Wheat | cytosol, nucleus, plastid | 65.0 | 63.73 |
| Os02t0793700-02 | Rice | extracellular | 63.0 | 61.76 |
| EES05944 | Sorghum | cytosol, nucleus, plastid | 63.0 | 61.16 |
| KRH75821 | Soybean | cytosol, nucleus, plastid | 51.0 | 60.71 |
| Zm00001d018363_P001 | Maize | mitochondrion | 61.0 | 58.65 |
| KRH25811 | Soybean | mitochondrion | 55.0 | 56.12 |
| PGSC0003DMT400076936 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 45.0 | 31.03 |
| PGSC0003DMT400011501 | Potato | cytosol | 36.0 | 26.47 |
| PGSC0003DMT400037158 | Potato | mitochondrion | 56.0 | 24.67 |
| PGSC0003DMT400002456 | Potato | endoplasmic reticulum | 40.0 | 16.67 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400038438 | EnsemblPlantsGene:PGSC0003DMG400014836 | EntrezGene:102598454 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf |
| InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF26 | PFAM:PF00173 | PGSC:PGSC0003DMG400014836 |
| RefSeq:XP_006343515.1 | SMART:SM01117 | SUPFAM:SSF55856 | UniParc:UPI00029562B4 | UniProt:M1B6V6 | MapMan:11.3.2.1.4 |
Description
Steroid binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014836]
Coordinates
chr8:-:18104826..18105445
Molecular Weight (calculated)
10795.7 Da
IEP (calculated)
4.366
GRAVY (calculated)
-0.329
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MELTADELKA YDGSDPSKPI YVAIKGRIFD VSAGNSFYGP GGPYCMFAGK DASRALAKMS KNEEDVSPSL DGLSEKEMGV LNDWETKFEA KYSIVGTVIS
1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS
Arabidopsis Description
MP3MAPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.