Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62716 | Soybean | mitochondrion | 33.09 | 56.96 |
| PGSC0003DMT400029206 | Potato | cytosol | 26.47 | 36.0 |
| PGSC0003DMT400038438 | Potato | cytosol | 26.47 | 36.0 |
| PGSC0003DMT400037158 | Potato | mitochondrion | 52.94 | 31.72 |
| Solyc06g035870.2.1 | Tomato | plastid | 52.94 | 30.0 |
| PGSC0003DMT400076936 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 27.94 | 26.21 |
| PGSC0003DMT400002456 | Potato | endoplasmic reticulum | 22.06 | 12.5 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011501 | EnsemblPlantsGene:PGSC0003DMG400004519 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR036400 | PANTHER:PTHR10281 |
| PANTHER:PTHR10281:SF45 | PGSC:PGSC0003DMG400004519 | SUPFAM:SSF55856 | UniParc:UPI0002951D0F | UniProt:M0ZZN0 | MapMan:11.3.2.1.4 |
Description
Steroid binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004519]
Coordinates
chr6:-:37234327..37234737
Molecular Weight (calculated)
14039.9 Da
IEP (calculated)
4.010
GRAVY (calculated)
-0.586
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYGPGGPYA LFAGKDASRA LAKLSFEEKD LTGDISGLGA FELDALQDWE YKFMSKYVKV GTVKQAVPVN DGEANDGSVE GTDGEAKPAE GDASGNAKPL
101: EDDGPSKGSE AGADGPSETV AAESVVKSEA DVDKKD
101: EDDGPSKGSE AGADGPSETV AAESVVKSEA DVDKKD
001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
Arabidopsis Description
MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.