Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032055.1-P | Field mustard | cytosol | 99.0 | 99.0 |
| AT2G24940.1 | Thale cress | nucleus | 93.0 | 93.0 |
| VIT_04s0008g06870.t01 | Wine grape | cytosol, nucleus, plastid | 81.0 | 81.82 |
| KRH61642 | Soybean | cytosol | 77.0 | 77.0 |
| Solyc08g029160.1.1 | Tomato | extracellular | 76.0 | 76.0 |
| PGSC0003DMT400038438 | Potato | cytosol | 76.0 | 76.0 |
| PGSC0003DMT400029206 | Potato | cytosol | 75.0 | 75.0 |
| KRH31695 | Soybean | cytosol | 55.0 | 69.62 |
| KRH52307 | Soybean | nucleus | 77.0 | 69.37 |
| EES05944 | Sorghum | cytosol, nucleus, plastid | 65.0 | 63.11 |
| GSMUA_Achr6P03970_001 | Banana | cytosol | 63.0 | 63.0 |
| KRH75821 | Soybean | cytosol, nucleus, plastid | 52.0 | 61.9 |
| TraesCS6D01G336900.1 | Wheat | cytosol, nucleus, plastid | 63.0 | 61.76 |
| TraesCS6B01G387500.1 | Wheat | unclear | 63.0 | 61.76 |
| TraesCS6A01G354500.1 | Wheat | cytosol, nucleus, plastid | 63.0 | 61.76 |
| HORVU6Hr1G084640.1 | Barley | cytosol, nucleus, plastid | 63.0 | 61.76 |
| Zm00001d018363_P001 | Maize | mitochondrion | 64.0 | 61.54 |
| Os02t0793700-02 | Rice | extracellular | 61.0 | 59.8 |
| KRH25811 | Soybean | mitochondrion | 53.0 | 54.08 |
| CDY37905 | Canola | cytosol | 40.0 | 30.3 |
| CDY71101 | Canola | endoplasmic reticulum | 51.0 | 22.97 |
| CDY61583 | Canola | endoplasmic reticulum, extracellular, golgi | 50.0 | 22.94 |
| CDY00522 | Canola | endoplasmic reticulum, extracellular, golgi | 50.0 | 22.94 |
| CDY05880 | Canola | endoplasmic reticulum | 50.0 | 22.52 |
| CDX87002 | Canola | endoplasmic reticulum | 43.0 | 19.63 |
| CDY08286 | Canola | golgi | 42.0 | 17.28 |
| CDY06492 | Canola | golgi | 42.0 | 17.21 |
Protein Annotations
| EnsemblPlants:CDY36148 | EnsemblPlantsGene:GSBRNA2T00059996001 | Gene3D:3.10.120.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 | InterPro:IPR036400 |
| PANTHER:PTHR10281 | PANTHER:PTHR10281:SF26 | PFAM:PF00173 | ProteinID:CDY36148 | ProteinID:CDY36148.1 | SMART:SM01117 |
| SUPFAM:SSF55856 | UniParc:UPI0004EC4226 | UniProt:A0A078HH09 | MapMan:11.3.2.1.4 | : | : |
Description
BnaC04g37460DProbable steroid-binding protein 3 [Source:Projected from Arabidopsis thaliana (AT2G24940) UniProtKB/Swiss-Prot;Acc:Q9SK39]
Coordinates
chrLK032368:-:10445..11121
Molecular Weight (calculated)
11003.9 Da
IEP (calculated)
4.854
GRAVY (calculated)
-0.529
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MEFTAEQLSQ YNGTDSSKPI YVAIKGRVFD VTTGKSFYGA GGDYAMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEMTT LNDWEKKFEA KYPVVGRVIS
1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS
Arabidopsis Description
MP3MAPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.