CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037079.1-P	Field mustard	golgi	100.0	100.0
CDY06492	Canola	golgi	95.06	94.67
AT4G14965.1	Thale cress	golgi	84.77	84.08
KRG90070	Soybean	endoplasmic reticulum	69.14	69.71
KRH17625	Soybean	endoplasmic reticulum, golgi, vacuole	67.08	67.63
PGSC0003DMT400002456	Potato	endoplasmic reticulum	66.67	67.5
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	64.2	64.2
EER95310	Sorghum	endoplasmic reticulum, golgi	62.14	63.71
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	61.73	63.29
Os03t0205500-01	Rice	endoplasmic reticulum	61.32	62.87
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	60.91	62.45
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	60.91	58.96
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	56.79	58.23
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	58.44	57.96
Zm00001d048139_P001	Maize	cytosol	38.27	55.03
Zm00001d048140_P001	Maize	extracellular, plasma membrane	17.28	50.6
CDY36148	Canola	nucleus	17.28	42.0
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	56.79	41.19
CDY37905	Canola	cytosol	13.99	25.76
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	20.16	22.48
CDY71101	Canola	endoplasmic reticulum	20.16	22.07
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	19.75	22.02
CDY05880	Canola	endoplasmic reticulum	19.75	21.62
CDX87002	Canola	endoplasmic reticulum	18.93	21.0

Protein Annotations

EnsemblPlants:CDY08286	EnsemblPlantsGene:GSBRNA2T00125622001	Gene3D:3.10.120.10	GO:A0A078F4G2	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:IPR001199	InterPro:IPR036400	PANTHER:PTHR10281
PANTHER:PTHR10281:SF4	PFAM:PF00173	ProteinID:CDY08286	ProteinID:CDY08286.1	SEG:seg	SMART:SM01117
SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI00025475D7	UniProt:A0A078F4G2	MapMan:11.3.2.1.4	:

Description

BnaA05g13330DBnaA05g13330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4G2]

Coordinates

chrLK031984:-:644502..646722

Molecular Weight (calculated)

26828.8 Da

IEP (calculated)

8.112

GRAVY (calculated)

-0.387

Length

243 amino acids

Sequence
(BLAST)

001: MSLRRILLSP FVGVSLIVVL LALYFRSSFK SPPQHNQRLF SAEELALYNG TDETLPILLG ILGSVYDVTK GKSHYGSGGG YNHFAGRDAS RAFVSGNFTG
101: DGLTDSLHGL SSSEVKSIVD WRGFYSRTYT PVGKLVGRYY DSQGNPTKHL KGAEAKASRG AQLMEKQKIE EDKQKNCNSR WSQDEGGEVW CDVGVPRLVQ
201: RPLEIAITGS MSKRCACFEE DQLDQSGLEI YKDCEPLAKT CKV

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.