Factsheet for Os03t0205500-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95310	Sorghum	endoplasmic reticulum, golgi	87.76	87.76
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	87.34	87.34
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	86.5	86.5
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	80.59	80.59
Zm00001d048139_P001	Maize	cytosol	53.59	75.15
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	69.2	66.94
Zm00001d048140_P001	Maize	extracellular, plasma membrane	23.21	66.27
KRG90070	Soybean	endoplasmic reticulum	65.4	64.32
KRH17625	Soybean	endoplasmic reticulum, golgi, vacuole	63.29	62.24
Bra037079.1-P	Field mustard	golgi	62.87	61.32
CDY08286	Canola	golgi	62.87	61.32
PGSC0003DMT400002456	Potato	endoplasmic reticulum	61.6	60.83
CDY06492	Canola	golgi	60.34	58.61
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	59.92	58.44
AT4G14965.1	Thale cress	golgi	59.92	57.96
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	58.65	55.38
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	71.31	50.45
Os02t0793700-02	Rice	extracellular	15.19	35.29
Os03t0321000-01	Rice	endoplasmic reticulum	21.52	26.7
Os10t0502600-01	Rice	plasma membrane, plastid	21.52	21.98
Os10t0502500-04	Rice	plastid	19.41	17.36
Os02t0640300-01	Rice	plasma membrane	23.21	16.52

Protein Annotations

MapMan:11.3.2.1.4	Gene3D:3.10.120.10	EntrezGene:4331992	UniProt:A0A0P0VUM5	ProteinID:BAS82859.1	InterPro:Cyt_B5-like_heme/steroid-bd
InterPro:Cyt_B5-like_heme/steroid_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0012505
GO:GO:0016020	GO:GO:0020037	InterPro:IPR001199	InterPro:IPR036400	EnsemblPlantsGene:Os03g0205500	EnsemblPlants:Os03t0205500-01
PFAM:PF00173	PANTHER:PTHR10281	PANTHER:PTHR10281:SF4	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix
UniParc:UPI0001C7EFCE	RefSeq:XP_015628404.1	SEG:seg	:	:	:

Description

Similar to fiber protein Fb38. (Os03t0205500-01)

Coordinates

chr3:+:5517532..5522391

Molecular Weight (calculated)

26286.5 Da

IEP (calculated)

8.327

GRAVY (calculated)

-0.276

Length

237 amino acids

Sequence
(BLAST)

001: MVLGARLLLG LALLAALLAV VLQLYRLRKP RLWTKEELAV YNGTDESLPI LLGILGSVFD VTKGKSNYGP GGGYHHFAGR DASRAFVSGN FTGDGLTDSL
101: QGLSSMEVNS IVDWRKFYFE RYIFAGKIVG RYYDDEGNPT KYLKGIEMKA KRGAQLLEKQ KSEEAKIPNC NSKWSQQEGG EVWCETGYPR LVRRPGDIAL
201: TGQVSQRCAC YKEEELDKAG LVVYEGCDYL STSCKVS

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.