CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 6
plasma membrane 7
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17625	Soybean	endoplasmic reticulum, golgi, vacuole	92.95	92.95
Bra037079.1-P	Field mustard	golgi	69.71	69.14
CDY08286	Canola	golgi	69.71	69.14
PGSC0003DMT400002456	Potato	endoplasmic reticulum	68.46	68.75
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	66.39	67.51
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	67.63	67.08
EER95310	Sorghum	endoplasmic reticulum, golgi	65.15	66.24
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	64.73	65.82
Os03t0205500-01	Rice	endoplasmic reticulum	64.32	65.4
AT4G14965.1	Thale cress	golgi	66.39	65.31
CDY06492	Canola	golgi	65.98	65.16
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	63.49	64.56
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	66.81	64.14
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	64.73	63.67
Zm00001d048139_P001	Maize	cytosol	41.91	59.76
Zm00001d048140_P001	Maize	extracellular, plasma membrane	18.26	53.01
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	61.41	44.18
KRH61642	Soybean	cytosol	15.35	37.0
KRH52307	Soybean	nucleus	16.18	35.14
KRH31695	Soybean	cytosol	11.2	34.18
KRH75821	Soybean	cytosol, nucleus, plastid	10.37	29.76
KRH62716	Soybean	mitochondrion	8.3	25.32
KRH25811	Soybean	mitochondrion	9.96	24.49
KRH09074	Soybean	endoplasmic reticulum	19.09	20.72
KRH38500	Soybean	endoplasmic reticulum	18.67	20.45
KRH35342	Soybean	endoplasmic reticulum	18.67	19.15
KRG91473	Soybean	endoplasmic reticulum	17.84	19.11
KRG94134	Soybean	endoplasmic reticulum	14.52	17.5

Protein Annotations

EntrezGene:100786670	MapMan:11.3.2.1.4	Gene3D:3.10.120.10	EMBL:ACUP02012540	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
EnsemblPlantsGene:GLYMA_20G065200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	UniProt:I1NE97	InterPro:IPR001199	InterPro:IPR036400
ProteinID:KRG90069.1	EnsemblPlants:KRG90070	ProteinID:KRG90070	ProteinID:KRG90070.1	PFAM:PF00173	PANTHER:PTHR10281
PANTHER:PTHR10281:SF4	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI000233D938	SEG:seg

Description

hypothetical protein

Coordinates

chr20:+:23030848..23038152

Molecular Weight (calculated)

26777.0 Da

IEP (calculated)

8.100

GRAVY (calculated)

-0.271

Length

241 amino acids

Sequence
(BLAST)

001: MSLKTLATSP LSGITLLVLL IALLLRFYIK FETAERLFSA EELSLFNGTD EGLPILLGIL GSVFDVTKGK SHYGSRGGYN HFAGRDASRA FVSGNFTGDG
101: LTDSLRGLSS TEVKSIVEWR DFYHKSYKYV GKLVGRYYDS QGNPTKYLKG VEVKAARGAQ LLEKQKIEEA KLPSCNSRWS QDEGGEVWCD VGYPRLVQRP
201: LEIALTGKMS KRCACFEDSQ LDQPGLEVYE GCDYHATRCK V

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.