Factsheet for GSMUA_Achr6P14400_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	72.24	74.68
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	70.2	72.57
Zm00001d048139_P001	Maize	cytosol	49.8	72.19
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	69.8	72.15
EER95310	Sorghum	endoplasmic reticulum, golgi	68.57	70.89
Os03t0205500-01	Rice	endoplasmic reticulum	66.94	69.2
KRH17625	Soybean	endoplasmic reticulum, golgi, vacuole	66.53	67.63
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	65.31	65.84
PGSC0003DMT400002456	Potato	endoplasmic reticulum	64.08	65.42
KRG90070	Soybean	endoplasmic reticulum	63.67	64.73
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	63.27	61.75
AT4G14965.1	Thale cress	golgi	61.63	61.63
CDY06492	Canola	golgi	60.41	60.66
Zm00001d048140_P001	Maize	extracellular, plasma membrane	20.0	59.04
CDY08286	Canola	golgi	57.96	58.44
Bra037079.1-P	Field mustard	golgi	57.96	58.44
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	71.84	52.54
GSMUA_Achr6P03970_001	Banana	cytosol	14.29	35.0
GSMUA_Achr9P05220_001	Banana	endoplasmic reticulum	18.37	23.44
GSMUA_Achr11P...	Banana	plasma membrane	20.41	18.8
GSMUA_Achr11P...	Banana	endoplasmic reticulum, nucleus, plastid	19.18	18.22
GSMUA_Achr5P12190_001	Banana	nucleus	18.37	17.58

Protein Annotations

EnsemblPlants:GSMUA_Achr6P14400_001	EnsemblPlants:GSMUA_Achr6T14400_001	EnsemblPlantsGene:GSMUA_Achr6G14400_001	Gene3D:3.10.120.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:IPR001199	InterPro:IPR036400	PANTHER:PTHR10281
PANTHER:PTHR10281:SF4	PFAM:PF00173	SEG:seg	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix
UniParc:UPI000295E006	UniProt:M0T6Y8	MapMan:11.3.2.1.4	:	:	:

Description

Putative Neuferricin [Source:GMGC_GENE;Acc:GSMUA_Achr6G14400_001]

Coordinates

chr6:+:9504991..9511999

Molecular Weight (calculated)

27344.9 Da

IEP (calculated)

9.263

GRAVY (calculated)

-0.353

Length

245 amino acids

Sequence
(BLAST)

001: MASPSRPTRV SSPLLLGLGF LIALIAFALQ FYIRKHLRPR LWTVEELSLY NGTEDGLPIL LGILGSVFDV TKGKTHYGPG GGYHHFSGRD ASRAFVSGNF
101: TGDGLTDSLH GLSTMEVKSV VDWRKFYMER YIFAGKLVGR YYDSQGNPTK YLKGVESKAK RGAQLLEKQK IEEAKIPSCN SKWSEQEGGE VWCETGYPRL
201: VKRPGDIALT GKISQRCACF KEEELGRPGL EVYKDCDYLS KSCRV

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.