Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09074 | Soybean | endoplasmic reticulum | 49.22 | 56.76 |
| AT5G52240.1 | Thale cress | endoplasmic reticulum | 48.05 | 55.91 |
| CDY61583 | Canola | endoplasmic reticulum, extracellular, golgi | 47.27 | 55.5 |
| Bra028301.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 46.88 | 55.05 |
| CDY00522 | Canola | endoplasmic reticulum, extracellular, golgi | 46.88 | 55.05 |
| KRH38500 | Soybean | endoplasmic reticulum | 47.27 | 55.0 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, nucleus, plastid | 55.08 | 54.65 |
| GSMUA_Achr11P... | Banana | plasma membrane | 55.47 | 53.38 |
| GSMUA_Achr6P03970_001 | Banana | cytosol | 20.7 | 53.0 |
| GSMUA_Achr9P05220_001 | Banana | endoplasmic reticulum | 35.55 | 47.4 |
| GSMUA_Achr6P14400_001 | Banana | endoplasmic reticulum, golgi | 17.58 | 18.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P12190_001 | EnsemblPlants:GSMUA_Achr5T12190_001 | EnsemblPlantsGene:GSMUA_Achr5G12190_001 | Gene3D:3.10.120.10 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR10281 |
| PANTHER:PTHR10281:SF64 | PFAM:PF00173 | SEG:seg | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix |
| UniParc:UPI00029510A2 | UniProt:M0SXU8 | MapMan:11.3.2.1.4 | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G12190_001]
Coordinates
chr5:-:8790086..8793067
Molecular Weight (calculated)
27860.4 Da
IEP (calculated)
4.188
GRAVY (calculated)
-0.561
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAEMWATL KEAIETYTGL SVTTFFTVLA IAAAFYYAVA GFFQPPPPPR RKRDAEELEG MEPLPPPVQL GEITEEELRD YDGSDPKKPL LMAIKGQIYD
101: VTQSRMFYGP GGPYALFAGK DASRALAKMS FEPKDLTSDI SELGPFELDA LQDWEYKFMS KYMKVGTVKK TVPVTEGSEA GASGTTEQTS QATEDAGIQA
201: DHGAQMEEDV ITEDLNADSE HNPTSKEKGA GYSDDAGRRA EVKETGSSAE GEESRP
101: VTQSRMFYGP GGPYALFAGK DASRALAKMS FEPKDLTSDI SELGPFELDA LQDWEYKFMS KYMKVGTVKK TVPVTEGSEA GASGTTEQTS QATEDAGIQA
201: DHGAQMEEDV ITEDLNADSE HNPTSKEKGA GYSDDAGRRA EVKETGSSAE GEESRP
001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
Arabidopsis Description
MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.