Factsheet for GSMUA_Achr11P21180_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus

Predictor Summary:

nucleus 2
plasma membrane 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G173400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	53.88	74.33
EER91417	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	57.75	66.82
TraesCS1D01G165400.1	Wheat	plastid	55.81	64.0
TraesCS1B01G191000.1	Wheat	golgi	55.81	64.0
HORVU1Hr1G045630.3	Barley	plasma membrane	56.2	62.77
Os10t0502600-01	Rice	plasma membrane, plastid	56.2	62.5
GSMUA_Achr11P...	Banana	plasma membrane	63.95	62.03
KRH09074	Soybean	endoplasmic reticulum	52.33	60.81
Zm00001d013914_P001	Maize	extracellular, plasma membrane, plastid	54.26	60.34
KRH38500	Soybean	endoplasmic reticulum	50.78	59.55
AT5G52240.1	Thale cress	endoplasmic reticulum	48.06	56.36
GSMUA_Achr5P12190_001	Banana	nucleus	54.65	55.08
GSMUA_Achr6P03970_001	Banana	cytosol	21.32	55.0
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	45.35	53.67
Bra028301.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	44.96	53.21
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	44.96	53.21
GSMUA_Achr9P05220_001	Banana	endoplasmic reticulum	35.27	47.4
TraesCS6D01G218900.1	Wheat	cytosol, endoplasmic reticulum, plastid	47.67	42.86
Os02t0640300-01	Rice	plasma membrane	53.49	41.44
TraesCS6B01G264900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	47.67	41.28
HORVU6Hr1G060500.1	Barley	cytosol, mitochondrion, nucleus	48.45	39.56
TraesCS6A01G235900.1	Wheat	cytosol	47.29	37.54
Zm00001d032531_P001	Maize	plasma membrane	57.36	36.19
EES05839	Sorghum	plastid	50.0	35.73
Zm00001d017380_P001	Maize	plastid	47.67	34.45
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	18.22	19.18

Protein Annotations

EnsemblPlants:GSMUA_Achr11P21180_001	EnsemblPlants:GSMUA_Achr11T21180_001	EnsemblPlantsGene:GSMUA_Achr11G21180_001	Gene3D:3.10.120.10	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
InterPro:IPR001199	InterPro:IPR036400	PANTHER:PTHR10281	PANTHER:PTHR10281:SF64	PFAM:PF00173	SEG:seg
SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI000295C4CC	UniProt:M0RU48	MapMan:11.3.2.1.4

Description

Membrane steroid-binding protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G21180_001]

Coordinates

chr11:-:21911023..21914278

Molecular Weight (calculated)

27959.3 Da

IEP (calculated)

4.259

GRAVY (calculated)

-0.653

Length

258 amino acids

Sequence
(BLAST)

001: MAMAEAWEVA KRAIEAYTGL SPATFFTLLA VAVALYHTVA GFLAPPPPPP PRSREVEPLA PPVQLGEVTE EELRAYDGSD PKKPLLMAIK GQIYDVTQSR
101: MFYGPGGPYA LFAGKDASRA LAKMSFEPVD LTGDISGLGP FELDALQDWE YKFMSKYVKV GTIKKTDETA PTTDGTDDGT TSQVTEKSTE ITDGTDRQAE
201: HSTEIKEDDP VETHANRDHD EESKQDGRFG HGDEAEPKEN DSSELKEAGA GAGESTKE

Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)

001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE

Arabidopsis Description

MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.