Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G218900.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 77.23 | 87.46 |
TraesCS6B01G264900.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 68.62 | 74.83 |
TraesCS1A01G173400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 36.0 | 62.57 |
KRH09074 | Soybean | endoplasmic reticulum | 34.15 | 50.0 |
KRH38500 | Soybean | endoplasmic reticulum | 33.23 | 49.09 |
TraesCS6A01G354500.1 | Wheat | cytosol, nucleus, plastid | 15.38 | 49.02 |
GSMUA_Achr11P... | Banana | plasma membrane | 38.77 | 47.37 |
GSMUA_Achr11P... | Banana | endoplasmic reticulum, nucleus, plastid | 37.54 | 47.29 |
AT5G52240.1 | Thale cress | endoplasmic reticulum | 32.0 | 47.27 |
HORVU6Hr1G060500.1 | Barley | cytosol, mitochondrion, nucleus | 45.85 | 47.15 |
Bra028301.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 30.77 | 45.87 |
CDY61583 | Canola | endoplasmic reticulum, extracellular, golgi | 30.77 | 45.87 |
CDY00522 | Canola | endoplasmic reticulum, extracellular, golgi | 30.77 | 45.87 |
Os02t0640300-01 | Rice | plasma membrane | 43.38 | 42.34 |
TraesCS4A01G127500.1 | Wheat | endoplasmic reticulum | 25.23 | 41.0 |
EES05839 | Sorghum | plastid | 44.92 | 40.44 |
TraesCS1A01G173200.3 | Wheat | golgi, plastid | 30.15 | 40.16 |
Zm00001d017380_P001 | Maize | plastid | 42.77 | 38.94 |
TraesCS4A01G048100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 15.69 | 21.52 |
Protein Annotations
EnsemblPlants:TraesCS6A01G235900.1 | EnsemblPlantsGene:TraesCS6A01G235900 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 |
InterPro:IPR036400 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF45 | PFAM:PF00173 | SEG:seg | SMART:SM01117 |
SUPFAM:SSF55856 | TMHMM:TMhelix | MapMan:11.3.2.1.4 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:445503687..445506807
Molecular Weight (calculated)
34943.9 Da
IEP (calculated)
4.711
GRAVY (calculated)
-0.529
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAAGEWW EAAKATIAAY TGLPPEAFIT VAAVIAGLYM ALSGSFARPA PSPPRRREAE DERTLEALPP PVQLGEVTEK ELGLYDGSDP KKPLLIAING
101: QIYDVTQSRI FYGPGGPYAL FAGRDVSRAL AKMSFELSDL TGDVSGLGPL EVEALQEWEQ KFMGKYVKVG TIKKTILVSE EDGRAHAEIS GRGFDANAIQ
201: RNHELAPEKN RAENTTAGHV SAMEQPMKIS HVGESKSIHE DEVKTPEETP GVDLRNTSST SGGGEREDTG QKAKQAPDVD VNGIRNREGT GGSREVPGVG
301: SNNTNIHQDE VEKLKEASDI EVKYA
101: QIYDVTQSRI FYGPGGPYAL FAGRDVSRAL AKMSFELSDL TGDVSGLGPL EVEALQEWEQ KFMGKYVKVG TIKKTILVSE EDGRAHAEIS GRGFDANAIQ
201: RNHELAPEKN RAENTTAGHV SAMEQPMKIS HVGESKSIHE DEVKTPEETP GVDLRNTSST SGGGEREDTG QKAKQAPDVD VNGIRNREGT GGSREVPGVG
301: SNNTNIHQDE VEKLKEASDI EVKYA
001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
Arabidopsis Description
MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.