Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 5
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G177200.1 | Wheat | endoplasmic reticulum | 95.5 | 96.46 |
| TraesCS4D01G178900.2 | Wheat | endoplasmic reticulum | 81.5 | 83.16 |
| HORVU4Hr1G052100.3 | Barley | endoplasmic reticulum | 83.0 | 81.37 |
| Os03t0321000-01 | Rice | endoplasmic reticulum | 68.5 | 71.73 |
| EER94942 | Sorghum | endoplasmic reticulum | 66.0 | 64.39 |
| Zm00001d028955_P001 | Maize | endoplasmic reticulum | 62.0 | 62.63 |
| TraesCS6A01G354500.1 | Wheat | cytosol, nucleus, plastid | 30.5 | 59.8 |
| GSMUA_Achr9P05220_001 | Banana | endoplasmic reticulum | 48.5 | 50.52 |
| TraesCS1A01G173400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 44.5 | 47.59 |
| TraesCS1A01G173200.3 | Wheat | golgi, plastid | 42.5 | 34.84 |
| TraesCS6A01G235900.1 | Wheat | cytosol | 41.0 | 25.23 |
| TraesCS4A01G048100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 25.5 | 21.52 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G127500.1 | EnsemblPlantsGene:TraesCS4A01G127500 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 |
| InterPro:IPR036400 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF66 | PFAM:PF00173 | SEG:seg | SMART:SM01117 |
| SUPFAM:SSF55856 | TMHMM:TMhelix | MapMan:11.3.2.1.4 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:164522391..164526087
Molecular Weight (calculated)
21362.0 Da
IEP (calculated)
4.059
GRAVY (calculated)
-0.221
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQGIADAV QAYTGLSPAA AFTVLALMLA TYLIVSTLFV APDAAPSAPA AHPKPPQQQE EGTEAEAEAE PEPFVPPFPD PVQVGEITLE QLRAYDGKDP
101: AKSILIAIRG QVYDVSRGRL FYGPQGPYSL FAGRDASRAL ALMSFDLNDL TGDLEGLSPD ELEVLQDWEE KFKERYPVVG HLPGENGTAG AQPDHEAEKA
101: AKSILIAIRG QVYDVSRGRL FYGPQGPYSL FAGRDASRAL ALMSFDLNDL TGDLEGLSPD ELEVLQDWEE KFKERYPVVG HLPGENGTAG AQPDHEAEKA
1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS
Arabidopsis Description
MP3MAPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.