Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 5
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G127500.1 | Wheat | endoplasmic reticulum | 96.46 | 95.5 |
| TraesCS4D01G178900.2 | Wheat | endoplasmic reticulum | 81.31 | 82.14 |
| HORVU4Hr1G052100.3 | Barley | endoplasmic reticulum | 83.33 | 80.88 |
| Os03t0321000-01 | Rice | endoplasmic reticulum | 68.69 | 71.2 |
| EER94942 | Sorghum | endoplasmic reticulum | 66.16 | 63.9 |
| Zm00001d028955_P001 | Maize | endoplasmic reticulum | 62.63 | 62.63 |
| TraesCS6B01G387500.1 | Wheat | unclear | 30.81 | 59.8 |
| GSMUA_Achr9P05220_001 | Banana | endoplasmic reticulum | 48.48 | 50.0 |
| TraesCS1B01G191000.1 | Wheat | golgi | 45.45 | 40.0 |
| TraesCS1B01G191100.2 | Wheat | plastid | 41.41 | 33.61 |
| TraesCS6B01G264900.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 41.92 | 27.85 |
| TraesCS4B01G256900.1 | Wheat | endoplasmic reticulum | 24.75 | 20.68 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G177200.1 | EnsemblPlantsGene:TraesCS4B01G177200 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 |
| InterPro:IPR036400 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF66 | PFAM:PF00173 | SEG:seg | SMART:SM01117 |
| SUPFAM:SSF55856 | TMHMM:TMhelix | MapMan:11.3.2.1.4 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:387792755..387800966
Molecular Weight (calculated)
21271.0 Da
IEP (calculated)
4.144
GRAVY (calculated)
-0.196
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQGIADAV QAYTGLSPAA AFTVLALMLA TYLIVSTLFV APDAAASAPA AHPKPPQQQE QGTEAEAEPE PFVPPFPDPV QVGEITLEQL RAYDGKDTAK
101: SILIAIRGQV YDVSRGRLFY GPQGPYSLFA GRDASRALAL MSFDLNDLTG DLEGLSPDEL EVLQDWEEKF KERYPVVGHL PCEKATAGAQ PDHEEEKA
101: SILIAIRGQV YDVSRGRLFY GPQGPYSLFA GRDASRALAL MSFDLNDLTG DLEGLSPDEL EVLQDWEEKF KERYPVVGHL PCEKATAGAQ PDHEEEKA
001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
Arabidopsis Description
MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.