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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, nucleus
Any Predictor:cytosol, nucleus, secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G218900.1 Wheat cytosol, endoplasmic reticulum, plastid 75.17 78.05
TraesCS6A01G235900.1 Wheat cytosol 74.83 68.62
TraesCS1B01G191000.1 Wheat golgi 40.94 54.22
KRH09074 Soybean endoplasmic reticulum 38.59 51.8
KRH38500 Soybean endoplasmic reticulum 36.58 49.55
TraesCS6B01G387500.1 Wheat unclear 16.78 49.02
AT5G52240.1 Thale cress endoplasmic reticulum 35.57 48.18
GSMUA_Achr11P... Banana plasma membrane 42.62 47.74
GSMUA_Achr11P... Banana endoplasmic reticulum, nucleus, plastid 41.28 47.67
Bra028301.1-P Field mustard endoplasmic reticulum, extracellular, golgi 34.56 47.25
CDY61583 Canola endoplasmic reticulum, extracellular, golgi 34.56 47.25
CDY00522 Canola endoplasmic reticulum, extracellular, golgi 34.56 47.25
HORVU6Hr1G060500.1 Barley cytosol, mitochondrion, nucleus 47.65 44.94
TraesCS1B01G191100.2 Wheat plastid 36.24 44.26
Os02t0640300-01 Rice plasma membrane 47.65 42.64
TraesCS4B01G177200.1 Wheat endoplasmic reticulum 27.85 41.92
Zm00001d017380_P001 Maize plastid 45.64 38.1
EES05839 Sorghum plastid 45.64 37.67
TraesCS4B01G256900.1 Wheat endoplasmic reticulum 18.79 23.63
Protein Annotations
EnsemblPlants:TraesCS6B01G264900.1EnsemblPlantsGene:TraesCS6B01G264900Gene3D:3.10.120.10InterPro:Cyt_B5-like_heme/steroid-bdInterPro:Cyt_B5-like_heme/steroid_sfInterPro:IPR001199
InterPro:IPR036400PANTHER:PTHR10281PANTHER:PTHR10281:SF45PFAM:PF00173SEG:segSMART:SM01117
SUPFAM:SSF55856MapMan:11.3.2.1.4::::
Description
No Description!
Coordinates
chr6B:-:476176237..476192350
Molecular Weight (calculated)
32125.6 Da
IEP (calculated)
4.488
GRAVY (calculated)
-0.467
Length
298 amino acids
Sequence
(BLAST)
001: MALAAAGEWW EAAKATIAAY TGLPPEAFTA VVAVIAVLYV SGLFTRPAPS PPIRREAEDE RTLEPLPPPV QLGEVTEKEL GIYDGSDPKK PLLMAIKGQI
101: YDVTQSRMFY GPGGPYALFA GRDASRALAK MSFELSDLTS DVSGLGPLEV EALQEWEQKF MGKYVKVGTI KKTILVSEED GRAHADISER GFDSNVIQRN
201: HELVPEENRA ETTTAGHVSA MEQPMKIYHV GHSKSVHEDE VETPEETPGA DLRNTSSTGY GGEPEDAGEK AKEAPDVDVN GSRNRESVGG SREAPSVG
Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)
001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
Arabidopsis Description
MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.