Factsheet for GSMUA_Achr11P04110_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G173400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	50.75	72.19
EER91417	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	55.64	66.37
GSMUA_Achr11P...	Banana	endoplasmic reticulum, nucleus, plastid	62.03	63.95
TraesCS1D01G165400.1	Wheat	plastid	52.26	61.78
Os10t0502600-01	Rice	plasma membrane, plastid	53.76	61.64
TraesCS1B01G191000.1	Wheat	golgi	51.88	61.33
Zm00001d013914_P001	Maize	extracellular, plasma membrane, plastid	52.26	59.91
HORVU1Hr1G045630.3	Barley	plasma membrane	51.13	58.87
KRH38500	Soybean	endoplasmic reticulum	48.5	58.64
KRH09074	Soybean	endoplasmic reticulum	48.87	58.56
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	46.62	56.88
Bra028301.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	45.86	55.96
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	45.86	55.96
AT5G52240.1	Thale cress	endoplasmic reticulum	46.24	55.91
GSMUA_Achr5P12190_001	Banana	nucleus	53.38	55.47
GSMUA_Achr6P03970_001	Banana	cytosol	20.68	55.0
GSMUA_Achr9P05220_001	Banana	endoplasmic reticulum	34.21	47.4
TraesCS6D01G218900.1	Wheat	cytosol, endoplasmic reticulum, plastid	47.37	43.9
TraesCS6B01G264900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	47.74	42.62
Os02t0640300-01	Rice	plasma membrane	49.62	39.64
TraesCS6A01G235900.1	Wheat	cytosol	47.37	38.77
HORVU6Hr1G060500.1	Barley	cytosol, mitochondrion, nucleus	45.86	38.61
EES05839	Sorghum	plastid	47.74	35.18
Zm00001d032531_P001	Maize	plasma membrane	53.76	34.96
Zm00001d017380_P001	Maize	plastid	46.62	34.73
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	18.8	20.41

Protein Annotations

EnsemblPlants:GSMUA_Achr11P04110_001	EnsemblPlants:GSMUA_Achr11T04110_001	EnsemblPlantsGene:GSMUA_Achr11G04110_001	Gene3D:3.10.120.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:IPR001199	InterPro:IPR036400	PANTHER:PTHR10281
PANTHER:PTHR10281:SF64	PFAM:PF00173	SEG:seg	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix
UniParc:UPI00029590F3	UniProt:M0RP91	MapMan:11.3.2.1.4	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G04110_001]

Coordinates

chr11:+:3010113..3013312

Molecular Weight (calculated)

28646.1 Da

IEP (calculated)

4.314

GRAVY (calculated)

-0.645

Length

266 amino acids

Sequence
(BLAST)

001: MAVAEVWEVS KRAIEAYTGL SPATFFTVLA VAVALYYTVA GFLAPPPPPP PRQVEVDPLP PPVQLGEVTE EELRAYDGSD PKKPLLMAIK GQIYDVTQSR
101: MFYGPGGPYA LFAGKDASRA LAKMSFEQND LTGDISGLGP FELEALQDWE YKFMGKYAKV GTIKKTVPET EGSNDGTSEI TEKTLEATDD SDKRDRHSAE
201: TKKDGQAESS TNVEHSEEPK EDGASGHGDE SEQHAELKGH GSSDHGEEVG CGAEFKEVGT GEGTKE

Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)

001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE

Arabidopsis Description

MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.