Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 5
- extracellular 3
- endoplasmic reticulum 5
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P03970_001 | Banana | cytosol | 27.6 | 53.0 |
| Os03t0321000-01 | Rice | endoplasmic reticulum | 50.52 | 50.79 |
| TraesCS4D01G178900.2 | Wheat | endoplasmic reticulum | 51.04 | 50.0 |
| TraesCS4A01G127500.1 | Wheat | endoplasmic reticulum | 50.52 | 48.5 |
| TraesCS4B01G177200.1 | Wheat | endoplasmic reticulum | 50.0 | 48.48 |
| HORVU4Hr1G052100.3 | Barley | endoplasmic reticulum | 50.52 | 47.55 |
| Zm00001d028955_P001 | Maize | endoplasmic reticulum | 47.92 | 46.46 |
| EER94942 | Sorghum | endoplasmic reticulum | 48.44 | 45.37 |
| GSMUA_Achr5P12190_001 | Banana | nucleus | 47.4 | 35.55 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, nucleus, plastid | 47.4 | 35.27 |
| GSMUA_Achr11P... | Banana | plasma membrane | 47.4 | 34.21 |
| GSMUA_Achr6P14400_001 | Banana | endoplasmic reticulum, golgi | 23.44 | 18.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P05220_001 | EnsemblPlants:GSMUA_Achr9T05220_001 | EnsemblPlantsGene:GSMUA_Achr9G05220_001 | Gene3D:3.10.120.10 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR10281 |
| PANTHER:PTHR10281:SF40 | PFAM:PF00173 | SEG:seg | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix |
| UniParc:UPI000296D7D3 | UniProt:M0TXN1 | MapMan:11.3.2.1.4 | : | : | : |
Description
Membrane steroid-binding protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G05220_001]
Coordinates
chr9:-:3372097..3374451
Molecular Weight (calculated)
20962.7 Da
IEP (calculated)
4.016
GRAVY (calculated)
-0.186
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFYSTVVAA IDAYTGLSPA AFFTILALMF GVYRLVSSLF VYPDDAAAEK TSPPPAPPAM QPFVPPEPVQ MGDITLEELK AYDGSDPNKP LLMAIKGQVY
101: DVSMGRLFYG PGGPYAFFAG KETSRALALM SFDPSDINSN LEDLSEAELE VLHDWEEKFK EKYVKVGQIV PESSKVGDDN ESSDQIKGNQ DE
101: DVSMGRLFYG PGGPYAFFAG KETSRALALM SFDPSDINSN LEDLSEAELE VLHDWEEKFK EKYVKVGQIV PESSKVGDDN ESSDQIKGNQ DE
001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE
Arabidopsis Description
MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.