Factsheet for Os02t0640300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 5
plastid 1
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0502600-01	Rice	plasma membrane, plastid	40.54	58.19
GSMUA_Achr11P...	Banana	endoplasmic reticulum, nucleus, plastid	41.44	53.49
KRH09074	Soybean	endoplasmic reticulum	35.44	53.15
Os02t0793700-02	Rice	extracellular	16.22	52.94
KRH38500	Soybean	endoplasmic reticulum	34.53	52.27
AT5G52240.1	Thale cress	endoplasmic reticulum	33.63	50.91
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	32.73	50.0
GSMUA_Achr11P...	Banana	plasma membrane	39.64	49.62
Bra028301.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	32.43	49.54
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	32.43	49.54
TraesCS6D01G218900.1	Wheat	cytosol, endoplasmic reticulum, plastid	42.64	49.48
Os03t0321000-01	Rice	endoplasmic reticulum	28.23	49.21
TraesCS6B01G264900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	42.64	47.65
Zm00001d017380_P001	Maize	plastid	49.55	46.22
TraesCS6A01G235900.1	Wheat	cytosol	42.34	43.38
EES05839	Sorghum	plastid	43.84	40.44
HORVU6Hr1G060500.1	Barley	cytosol, mitochondrion, nucleus	37.84	39.87
Os10t0502500-04	Rice	plastid	30.93	38.87
Os03t0205500-01	Rice	endoplasmic reticulum	16.52	23.21

Protein Annotations

MapMan:11.3.2.1.4	Gene3D:3.10.120.10	ProteinID:BAD25359.1	ProteinID:BAF09460.1	ProteinID:BAS79980.1	InterPro:Cyt_B5-like_heme/steroid-bd
InterPro:Cyt_B5-like_heme/steroid_sf	ProteinID:EEE57457.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	InterPro:IPR001199	InterPro:IPR036400
EnsemblPlantsGene:Os02g0640300	EnsemblPlants:Os02t0640300-01	PFAM:PF00173	PANTHER:PTHR10281	PANTHER:PTHR10281:SF45	UniProt:Q6H7E0
SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI00003B443B	SEG:seg	:

Description

Similar to Membrane steroid binding protein 1 (AtMP1). (Os02t0640300-01)

Coordinates

chr2:-:25696949..25698399

Molecular Weight (calculated)

35494.8 Da

IEP (calculated)

4.184

GRAVY (calculated)

-0.564

Length

333 amino acids

Sequence
(BLAST)

001: MVAAAEWWEA TIAAYTGLSP AAFFTAVAVA AALYVAVSGL LTRRPPPLPR RQEEARASQP LPPPVQLGEV TEEELRVYDG SDPNKPLLMA IKGQIYDVTQ
101: SRMFYGPGGP YALFAGRDAS RALAKMSFEL DDLTGDVSGL GPIELEALHE WEGKFMSKYV KVGTIKKIIP VSEGDAATHG GTSDRGIDVG TIESNRVPEP
201: EENGATSHAD AVEKSDADVS THNHEDVVEK SDELLESGVD TRSTHEDAVG KPKEETEDAD VQKTISTEVA GEGKGAPDED DRNTCSLEDA IEKPKETAYI
301: DVKDTSGHEV AGEPKEAPDV DGNNTSSNQD GSG

Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)

001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE

Arabidopsis Description

MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.