Factsheet for HORVU6Hr1G060500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G218900.1	Wheat	cytosol, endoplasmic reticulum, plastid	47.15	51.92
HORVU1Hr1G045630.3	Barley	plasma membrane	37.66	51.52
KRH38500	Soybean	endoplasmic reticulum	35.76	51.36
KRH09074	Soybean	endoplasmic reticulum	35.76	50.9
HORVU6Hr1G084640.1	Barley	cytosol, nucleus, plastid	15.82	49.02
GSMUA_Achr11P...	Banana	endoplasmic reticulum, nucleus, plastid	39.56	48.45
AT5G52240.1	Thale cress	endoplasmic reticulum	33.23	47.73
TraesCS6B01G264900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	44.94	47.65
Bra028301.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	31.65	45.87
CDY00522	Canola	endoplasmic reticulum, extracellular, golgi	31.65	45.87
CDY61583	Canola	endoplasmic reticulum, extracellular, golgi	31.65	45.87
GSMUA_Achr11P...	Banana	plasma membrane	38.61	45.86
TraesCS6A01G235900.1	Wheat	cytosol	47.15	45.85
HORVU4Hr1G052100.3	Barley	endoplasmic reticulum	25.95	40.2
Os02t0640300-01	Rice	plasma membrane	39.87	37.84
Zm00001d017380_P001	Maize	plastid	41.46	36.69
EES05839	Sorghum	plastid	41.46	36.29
HORVU1Hr1G045610.5	Barley	plastid	30.38	33.57
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	16.14	15.22

Protein Annotations

EnsemblPlants:HORVU6Hr1G060500.1	EnsemblPlantsGene:HORVU6Hr1G060500	Gene3D:3.10.120.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:IPR001199	InterPro:IPR036400	PANTHER:PTHR10281	PANTHER:PTHR10281:SF45
PFAM:PF00173	SEG:seg	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI000B484738
UniProt:A0A287UCT1	MapMan:11.3.2.1.4	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:402459804..402462054

Molecular Weight (calculated)

34434.5 Da

IEP (calculated)

5.121

GRAVY (calculated)

-0.469

Length

316 amino acids

Sequence
(BLAST)

001: IHRKEHSSRV PQFHSGPFHL NVVSYHLLCH SSSMAMAAAG EWWEAAKAAI AAYAGLPPEA FITVVAVIAG LYMAVSSSFA RPAPLPPAPR RREAEDERTL
101: EPLPPPVQLG EVTEKDLGLY DGSDPKKPLL MAIKGQIYDV TQSRMFYGLG GPYALFAGRD ASRALAKMSF EPSDLTSDVS GLDPLEVETL QEWEQKFMGK
201: YVKVGTIMKT VPVSEEDGAA HAQMSGRGFN ANPIQSNHEL VPEETRAETT TTGHVIAMEQ PRETSDVAHV GDHKSMHEHE VERPEETTSA NFRNTSNTGD
301: GEEPADAGEK AKQAQM

Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)

001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE

Arabidopsis Description

MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.