Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 7
- extracellular 5
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06492 | Canola | golgi | 87.35 | 87.7 |
| Bra037079.1-P | Field mustard | golgi | 84.08 | 84.77 |
| CDY08286 | Canola | golgi | 84.08 | 84.77 |
| PGSC0003DMT400002456 | Potato | endoplasmic reticulum | 69.8 | 71.25 |
| KRH17625 | Soybean | endoplasmic reticulum, golgi, vacuole | 69.8 | 70.95 |
| Solyc07g044830.2.1 | Tomato | endoplasmic reticulum | 68.98 | 69.55 |
| KRG90070 | Soybean | endoplasmic reticulum | 65.31 | 66.39 |
| VIT_02s0012g02780.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, vacuole | 64.49 | 62.95 |
| GSMUA_Achr6P14400_001 | Banana | endoplasmic reticulum, golgi | 61.63 | 61.63 |
| TraesCS4B01G256900.1 | Wheat | endoplasmic reticulum | 59.18 | 61.18 |
| EER95310 | Sorghum | endoplasmic reticulum, golgi | 58.37 | 60.34 |
| Os03t0205500-01 | Rice | endoplasmic reticulum | 57.96 | 59.92 |
| Zm00001d048139_P001 | Maize | cytosol | 41.22 | 59.76 |
| TraesCS4D01G256800.1 | Wheat | endoplasmic reticulum | 57.14 | 59.07 |
| TraesCS4A01G048100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 57.14 | 59.07 |
| Zm00001d048140_P001 | Maize | extracellular, plasma membrane | 17.14 | 50.6 |
| AT2G24940.1 | Thale cress | nucleus | 18.37 | 45.0 |
| HORVU4Hr1G069740.2 | Barley | golgi, mitochondrion, peroxisome, plastid | 57.96 | 42.39 |
| AT3G48890.1 | Thale cress | endoplasmic reticulum | 20.0 | 21.03 |
| AT5G52240.1 | Thale cress | endoplasmic reticulum | 18.37 | 20.45 |
Protein Annotations
| MapMan:11.3.2.1.4 | Gene3D:3.10.120.10 | EntrezGene:827155 | UniProt:A0A178UY73 | ProteinID:AEE83531.1 | EMBL:AK229457 |
| ArrayExpress:AT4G14965 | EnsemblPlantsGene:AT4G14965 | RefSeq:AT4G14965 | TAIR:AT4G14965 | RefSeq:AT4G14965-TAIR-G | EnsemblPlants:AT4G14965.1 |
| TAIR:AT4G14965.1 | EMBL:AY084353 | Unigene:At.33227 | Symbol:AtMAPR4 | EMBL:BT024469 | ProteinID:CAB46053.1 |
| ProteinID:CAB78537.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005496 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008289 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0020037 | InterPro:IPR001199 | InterPro:IPR036400 | RefSeq:NP_567451.1 | ProteinID:OAO98054.1 | PFAM:PF00173 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR10281 | PANTHER:PTHR10281:SF4 | UniProt:Q2HIW2 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix |
| UniParc:UPI0000162A44 | : | : | : | : | : |
Description
MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
Coordinates
chr4:+:8551244..8553618
Molecular Weight (calculated)
27168.2 Da
IEP (calculated)
8.346
GRAVY (calculated)
-0.370
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.